Protein Info for ABI39_RS06765 in Phocaeicola dorei CL03T12C01

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1169 transmembrane" amino acids 129 to 147 (19 residues), see Phobius details amino acids 167 to 190 (24 residues), see Phobius details PF20693: YobI-ATPase" amino acids 25 to 393 (369 residues), 379.5 bits, see alignment E=1.2e-117

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1169 amino acids)

>ABI39_RS06765 hypothetical protein (Phocaeicola dorei CL03T12C01)
MIRALNPKILTSEDSSYKTVKELNEVIEEALKKGEIKNIALTGPFGSGKSSILLTLRKNF
GNYEYLPISLATLKADEEENPPQKTDEEIEKLNRRIEYSILQQLIYREKTSTVQNSRFKR
IIHIDEGTLRKISLNAILFFISFLIAFEPKWLRVESICNALNWGDYNIIFDSIAILYMLT
ILYFVVEYFVRSYGNSKLNKLNLKDGVIEIKEETSIFNNHLDEILYFFQVTKYNVVIIED
LDRFGSPDIFLKLRELNQLLNESKIVSRNIVFVYAVKDDIFLNEERTKFFDYITTVIPVI
NPSNSKDILKAALNERGLEDNVIKDGDLRDMAFFVQDMRILTNIANEFQQYREKLCTGNN
QKLNLTKLLAMIVYKNYYPKDFAMLHRREGKVYNCIKEKPNFAKGALDEIAKKEETLENE
YQAFLKTKHLKESELRLIYLYKIRERINNKVTEFIIDGQNYSLDQISKDKDLFNKLISKR
EVCYSYWGYYGGNEHTSYTFDFNSIDKEINFKRRIALLRIPESKFERDRAMLYKQKLNVH
KYRLKILIGHYKQGESDLYKSIGLSEMMDVFIRRGFIDEEYYDYISFFYEGMVSLADREL
LLSIKRDIPKEYSYHIDKVENFVKELLPYMFETKAILNNDLLDYVSSSHKDYFNLIMNIL
ETDQAPLDFLAQYYLYGNAQKQVYEHYIEWDEIQSWINIESWNNNDEKNTLIEGWLKYSK
EICKEARGWLNNHYEFLTDRFENIGKERCLDLVIDSEFKKLNDKNSELLKQSIDNQAYEI
NSHNLCIIANFIFNDSQVEEGNLNLSRIRDTKYSIFIEDIENNIDKAVMHFSKDCKDETK
DSLLFILNSEKIKTDDKENYLIGQKELLDDDSNINTDELKTLAYNLFLINPTWKNVISYY
NNKNKDENILIKYIEHFSDNLGNQMIEKDDSEYSSLGAYLLGTTKLTIGTYSSIIKSFEI
EFEGYDGLRGLDRDRLLLLLSHNMLPFCEENTDLLKGMDIYADYLIKYHKQLLENLSASY
ISDCEVAYKILSSEVFTYEQKKRIISITPKDILIELDKLANQVLDIIINTNLKNIEEETI
IEVLENASNESYRVYIISLLILEYDYDDNKIAELLSLLGGKYIDIAERSKHPVLEETKWN
IKLAGALKHKRFISSAKEDKDGIRIYPKR