Protein Info for ABI39_RS03845 in Phocaeicola dorei CL03T12C01

Annotation: aminopeptidase P family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 593 PF01321: Creatinase_N" amino acids 8 to 135 (128 residues), 58.6 bits, see alignment E=2e-19 PF16189: Creatinase_N_2" amino acids 151 to 306 (156 residues), 172.2 bits, see alignment E=1.8e-54 PF00557: Peptidase_M24" amino acids 310 to 521 (212 residues), 156.4 bits, see alignment E=1.8e-49 PF16188: Peptidase_M24_C" amino acids 532 to 591 (60 residues), 85.5 bits, see alignment 3.9e-28

Best Hits

KEGG orthology group: K01262, Xaa-Pro aminopeptidase [EC: 3.4.11.9] (inferred from 96% identity to bvu:BVU_0828)

Predicted SEED Role

"Xaa-Pro aminopeptidase (EC 3.4.11.9)" (EC 3.4.11.9)

Isozymes

Compare fitness of predicted isozymes for: 3.4.11.9

Use Curated BLAST to search for 3.4.11.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (593 amino acids)

>ABI39_RS03845 aminopeptidase P family protein (Phocaeicola dorei CL03T12C01)
MKSEIINRIVSLRNFMRKHKLSAFIIPSTDPHSGEYIPKHWEARKWISGFTGSAGTVVVT
LDKAGLWTDSRYFLQATAQLENTGITLFKERLPETPSIVEWLGCVLNSENNVGIDGWVNS
YQETSNLQKELEKKQIHLTLTPDPFNELWTDRPALPDNKVFIHELKYAGLSCKDKITQIQ
EATRRNSCTGILISALDEVAWTLNLRGSDVHCNPVFVSYLLITEYSSTLYIIENKLSDEV
KDYLAENGVTVKPYSTIEKDLKDFTGKLLLSASINAAIHAAACTHSLIEIAPSPVLFLKA
VKNETEIEGFHRAMKRDGIAMVKFLRWLKTAVSTGNETEISIDKKLYEFRAGQDYFNGIS
FDTIAGYKDHGAIVHYEASPETDIPLKPEGMLLLDSGAQYLDGTTDITRTIVLGALTKEE
KTDYTLVLKGFIQLSMAQFPHGTCGTQLDALARLPMWKAGINYLHGTGHGVGCFLNVHEG
PHQFRMNHMPALLVPGMTVTNEPGIYKAGRHGVRTENTMLIVPSQETEFGTYYKFEPLTL
CPIDKEAILTDMLSDEEITWFNQYHEKVYNCLSPELNNEEREWLKEVTSPLKR