Protein Info for ABI39_RS03545 in Phocaeicola dorei CL03T12C01

Annotation: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 TIGR01326: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase" amino acids 7 to 425 (419 residues), 601.9 bits, see alignment E=2.9e-185 PF01053: Cys_Met_Meta_PP" amino acids 8 to 425 (418 residues), 431.2 bits, see alignment E=2.7e-133 PF00155: Aminotran_1_2" amino acids 69 to 187 (119 residues), 23.9 bits, see alignment E=2.3e-09

Best Hits

Swiss-Prot: 46% identical to CYSD_EMENI: Homocysteine synthase (cysD) from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)

KEGG orthology group: K01740, O-acetylhomoserine (thiol)-lyase [EC: 2.5.1.49] (inferred from 99% identity to bvu:BVU_0770)

MetaCyc: 45% identical to O-acetylhomoserine sulfhydrylase (Leptospira meyeri)
O-acetylhomoserine aminocarboxypropyltransferase. [EC: 2.5.1.49]

Predicted SEED Role

"O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)" in subsystem Methionine Biosynthesis (EC 2.5.1.48, EC 2.5.1.49)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.5.1.48, 2.5.1.49

Use Curated BLAST to search for 2.5.1.48 or 2.5.1.49

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (425 amino acids)

>ABI39_RS03545 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase (Phocaeicola dorei CL03T12C01)
MDKKYSRETLCVQAGWTPKKGEPRVLPIYQSTTFKYDTSEQMARLFDLEDSGYFYTRLQN
PTNDAVAAKIAALEGGVGAMLTSSGQAANFYAIFNICQAGDHFVCSSTIYGGTFNLFGVT
LKKLGIECTFIDANASEEEIDQAFRPNTKALFGETISNPSIDVLDIEKFARIAHKHGVPL
IVDNTFATPINCRPFEWGADIVTHSTTKYMDGHATSVGGAIVDSGNFDWEAHADKFPGLT
QPDESYHGLTYTKAFGKMAYMTKATAQLMRDLGSIQSPQNSFLLNLGLETLHLRVPRHCE
NAQKVAEWLEANPKVKWVNYCGLKSSKYYDLAQKYMPNGSCGVIAFGLNGTREEAIEFMD
RLKFICIVTHVADARTCVLHPASHTHRQLTDEQLREAGVAPDLIRLSVGIENVNDIIADI
EQALQ