Protein Info for ABI39_RS03495 in Phocaeicola dorei CL03T12C01

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1155 PF13086: AAA_11" amino acids 251 to 447 (197 residues), 28.4 bits, see alignment E=4.9e-10 PF13087: AAA_12" amino acids 667 to 846 (180 residues), 74 bits, see alignment E=4.5e-24 PF13091: PLDc_2" amino acids 903 to 1027 (125 residues), 36.8 bits, see alignment E=1.1e-12

Best Hits

KEGG orthology group: None (inferred from 94% identity to bvu:BVU_0756)

Predicted SEED Role

"FIG00898831: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1155 amino acids)

>ABI39_RS03495 hypothetical protein (Phocaeicola dorei CL03T12C01)
MDQTLLKYWKICLQDAERKAIAPKGARITLNIGDKILKFVPLKSIPVIFPDWKAEDSNEK
QKVMIAPCILLPEFENGWTSQSERPEYPFLITATMLPDGKLTVCENESDRIPIFIRKFLE
PNAANDRTITSLPKVDRLLSDFNTEITEWETYWRACEQLFKKATGKTFRTMNYHDNPEII
IIKASERNMAQPIITLYDKLLKDNDTTPHPLLNLLIQTKPTNVLPSPTTRKVYCNREHWA
QMSGDFPLSVSQRETLAMYTTPECTDIFVVNGPPGTGKTTFLQTVIANRLAHNILNNPEE
PEIIVASSANNQAITNILKDFKAETTNDTAHPRLSNRWLPELDTLGLYLSGKKELQEQYK
MMFNPMGDGFPATYDTPERQEEYKNFYLQCFNNFFGKAYQDETKCQQFLRKEMQALQKKI
IFCIQAAETTEYGNRKENNILQKFIRKFHEPLPSYDKVIEQWALTEEFKERYEKISSNPE
YGNLPYTEDMAVRLDISYRYQMFWYAIHYREAEFIHRLSKCDEGKQRTQEAYTQRLKRLA
CVMPVFISTFHSLPKYMTYAENGKWDVPLYNGIDLLIVDESGQVSPELAVPSFSLAKQAI
LVGDIQQIEPVWSISDEYSFINLKNLGIVSNQSSEKYRFLENNGFLSSSGSIMKLARKSC
NFTVKGEKGAFLTEHRRCVDSIIAYCNDYVYHGRLLPKKGNEVKYKSLPSKGYVHINSYS
SPGKTGSRLNRAEAEAIVCWLELEKDNLEKTYKKPIHEIVAVVTPFKAQEAEIRHQIQKI
SGNEKYKEMIIGTVHSLQGAQCPIVLFSTVNSPEDHSLFMERDGKYNMLNVAISRAQHHF
IVFGNMNIFHPEENTPAGNMAKWLFDAPSNEISNNFIYQQEIPLYTYHPTLRLSTTEEHV
QTLRQAFEKARRRLLIVSPFISIHAIENDQLIPLIRHTVQRGVDVTIYTDSSLDYDMKNK
HLLSHAKDGRNALIESGVTLIEVKGIHNKSLAIDNHTLIEGSFNWLSANRHKEYSRHECS
IIVSSFQADEYINNLIKELESREKTFQSLSKTTIYLDIDQKHPGFFTKESFNDCTEEDIC
RIKQKVQKLGIQKTVLPPYIRKQRETFPRAYEPWCTEEKEIICELMQKTNHLSIFIECLQ
RTGQAIQIQIEGKNN