Protein Info for A4249_RS14690 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: TIGR03862 family flavoprotein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 409 PF03486: HI0933_like" amino acids 12 to 399 (388 residues), 373.8 bits, see alignment E=2.9e-115 PF01494: FAD_binding_3" amino acids 12 to 45 (34 residues), 24.5 bits, see alignment 4.5e-09 TIGR00275: flavoprotein, HI0933 family" amino acids 14 to 398 (385 residues), 309.6 bits, see alignment E=2.9e-96 PF00890: FAD_binding_2" amino acids 15 to 64 (50 residues), 23.4 bits, see alignment 9.9e-09 TIGR03862: flavoprotein, TIGR03862 family" amino acids 34 to 406 (373 residues), 532.9 bits, see alignment E=3.9e-164

Best Hits

KEGG orthology group: K07007, (no description) (inferred from 65% identity to bsb:Bresu_0449)

Predicted SEED Role

"NAD(FAD)-utilizing dehydrogenases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160I039 at UniProt or InterPro

Protein Sequence (409 amino acids)

>A4249_RS14690 TIGR03862 family flavoprotein (Brevundimonas sp. GW460-12-10-14-LB2)
MQQSPSLTTSRTVHVIGAGPAGLMAAERLAQAGAAVVVHDRMPSVARKLLMAGRGGLNLT
HSEPLDRFMTRYGPAQPTAAAWIDRFTPADLTAWVEALGQETFVGSSGRVFPKAMKASPL
VRAWLARLEAQGVDVRTRSRWTGWRDGALTFETPEGERLERPDAVVLALGGASWPRLGSD
GAWAPWLEAQGASVSPFRPANVGFDVAWSALFRDRFAGQPLKGVAVTHGDRTARGEAMIA
RYGIEGGAIYALSAALRTTVETEGRAEIQIDLKPDVAVGKLTDRLSKPRGKASLSNHLRK
VVGLEAAAVALLYEAGPLPASPRALAERIKAMPLTLTGVQGLERAISSAGGVELDAVDER
LMLAARPGVFVAGEMLDWEAPTGGYLLQASFASAVVAAEGVIDWLDSRD