Protein Info for A4249_RS09020 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: TonB-dependent receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 547 PF00593: TonB_dep_Rec" amino acids 65 to 508 (444 residues), 115.8 bits, see alignment E=2.5e-37

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (547 amino acids)

>A4249_RS09020 TonB-dependent receptor (Brevundimonas sp. GW460-12-10-14-LB2)
MFKGGNALRFGGAALGGAINVVTPTGRTAASRNLIRIESGSFDTLRGHVALARDWGDWDL
YAAATVASSDGFRDNQSSDSKRLTLNLGRSFGEGRELRLIVQGNDLDQSVSSAVTRQQAL
TNPTAVPANNNTLAFARDVKSLRSTLLGRWRVDDSLSFEGAVYVVDKDLYHPISIVIDQN
SLQRGGYGRLDWNGRLGGMRADAYTGISYRGGTTDAFTFVAAGGARQGAKIGDSVQDATG
IDIFAEGRLFVTDRLALVAGGSYGRAERDYTNNLVPANNADATFDWFAPRIGLLWENEMG
AQIYANLTRSVEAPSYGALVQGNVPKFLPVDIQDAWTAEVGARGRRGPFTYDLSAYRAQI
EGELLNYSVNPTLNIPAATFNADDTVHQGIEAGLDWRIIDSTDGRLTLRQTYAWSDFLFK
NDRVYGDNRLPVVPEHLYRAELKYAHPAGWFVAPSVEWSPTDVLIDYANTRSATDGTPLT
APDYAILSFNAGWSLRGGVSLFLDARNLTDERYVSTVNAVTDATKVATAVFVPGEGRSAY
VGLRYAF