Protein Info for A4249_RS08580 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 75 to 98 (24 residues), see Phobius details amino acids 119 to 148 (30 residues), see Phobius details amino acids 155 to 181 (27 residues), see Phobius details amino acids 204 to 231 (28 residues), see Phobius details amino acids 258 to 282 (25 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 46% identity to bsb:Bresu_2611)

Predicted SEED Role

"FIG00449737: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HZP7 at UniProt or InterPro

Protein Sequence (300 amino acids)

>A4249_RS08580 hypothetical protein (Brevundimonas sp. GW460-12-10-14-LB2)
MSFSATDAAFEGFRVVRRHPIVAVAWGLVYLAVYVAMFGLGADKWASLMAAGEALEQSAN
PSMAEFQALGQTYAGALIWAAPIGLLVGAVLSGAVARSVLRPDESSWGYLRLGMDEVRVL
AVSLIVSLAVGLASGVGMMVVGAAIGFGAASGQALLILAGVLLIFAVFALIVWLAIKFSL
AVPMTIDRRKITIVESFAATKGHFWSLLGMAVIAIIMSLIVSILGMIIGAAADLATGGIQ
TLARFDGEGLGQILMQAWPAILVSSIVNAFLAALQLAVLYAPFAAAWNGLRGGQPTDVFS