Protein Info for A4249_RS08570 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: group III truncated hemoglobin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 164 PF01152: Bac_globin" amino acids 26 to 125 (100 residues), 22.5 bits, see alignment E=5.3e-09

Best Hits

KEGG orthology group: K06886, hemoglobin (inferred from 66% identity to oca:OCAR_4250)

Predicted SEED Role

"Truncated hemoglobins"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161IXM5 at UniProt or InterPro

Protein Sequence (164 amino acids)

>A4249_RS08570 group III truncated hemoglobin (Brevundimonas sp. GW460-12-10-14-LB2)
MQTRLRIEDPAGAAARREAAVQRLRDETGIDEAVIDAFVEGFYARVRDDALIGPIFADRI
IDWAPHLAQMKLFWSSVALSTGVYQGRPMPKHLPLPIDARHFDRWLELFAETARTLCPPI
AADHFIERARRIAESLELGVANASGVLLAKGGRFVRPTQSWTPK