Protein Info for A4249_RS08550 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: flagellar basal-body protein FlbY

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

Swiss-Prot: 47% identical to FLBY_CAUVC: Flagellar basal-body protein FlbY (flbY) from Caulobacter vibrioides (strain ATCC 19089 / CB15)

KEGG orthology group: None (inferred from 60% identity to bsb:Bresu_2607)

Predicted SEED Role

"flagellar basal-body protein FlbY"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HXK5 at UniProt or InterPro

Protein Sequence (145 amino acids)

>A4249_RS08550 flagellar basal-body protein FlbY (Brevundimonas sp. GW460-12-10-14-LB2)
MSDTELAQARVRQLTTLTLRLTERLKAETAAFADGRPQDVAAGLSETQEMANLYRRDSAH
VKANPALLSGAPLEDRRTLVDATREFDAVLTRHSRAVDAARQISEGLVRAIAAEVTAART
PASAYAADGRASLGDGRAVALNRTA