Protein Info for A4249_RS07475 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: tail fiber domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 932 PF12789: PTR" amino acids 285 to 335 (51 residues), 46.2 bits, see alignment 5.9e-16 amino acids 344 to 370 (27 residues), 11.6 bits, see alignment (E = 3.8e-05) amino acids 376 to 410 (35 residues), 11 bits, see alignment (E = 5.8e-05) PF04917: Shufflon_N" amino acids 759 to 848 (90 residues), 34.5 bits, see alignment E=2.5e-12 PF13884: Peptidase_S74" amino acids 844 to 892 (49 residues), 55.8 bits, see alignment 6.5e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A168NIH4 at UniProt or InterPro

Protein Sequence (932 amino acids)

>A4249_RS07475 tail fiber domain-containing protein (Brevundimonas sp. GW460-12-10-14-LB2)
MSGLTITTLAQQIEDLIGKSEQQTKAVTAWLGGSADGGPNNDGRYPFVDLGGREILVPSP
ASFSDMTSGPAAQASVAKVAAELARDLAKGHADRSDAQRILSEAARGAAVDARNLAQEHR
NHAGNHEANARYWAELAQGSGQSTSEDREIVEQLAEEVADNAALVAQDALDAAASAALAA
TFDPNLFDKKSDTLASSRLEGMIDPARIPVLVGQTPVVSTGGITNLTTVQQNGIRPGTLV
ATMDGRRWVYSGSGAKNVEANYIEQGDVTPVWSVIADKPSFFPSNIVNVAGLQSALDGKS
NVGHGHVIADVANLQAALDARSLTGHVHAWTTITDRPTIFPSDIANVSGLQAALDGRAAA
GHVHAWDTITGKPSTYPATAHLHNITDVNGLLDALNGKIASGSAATVTNLKFNTGLLYPD
GNHSVLKTGAAGSERYWRFDQNGWFYGLSGGLYIATNAHIAGDQLRVGPADSGSRTDVNR
GWVELRNDSNGYGPYIDLSADSTTDYHARLAWAGGRFDLQSTTSLHLTARGTNNHVRAYS
ETGKQNGDVLTEGGAEQTLSKQLTFSSTQNPQDAAAFATLEVRGSGGGYGAWMKFHRPGA
YGTYFGMFEDGKWGFGGWSTGATIYEFWTSKNLDANGLMRRYCDGWNTTTDGNERFYFAS
NGRSYYRSRGGHEFRNADDQRVVSIDNGGFLEATSGLSTLGNYLKIRGGSPTIYFKDTDS
RSAMIHVNSNVMHFLRGSGNDSEAWETVNGRWPLTINLENNEATMGGSINAENGNVYTQS
FYATSQVYSGFGHWFRVRGTGSGIYWEQHGGGFHMSDNDWVRVYNGKNFYCSAQVRANTV
VGESDRRLKTNIAPITDAMSKVRALEGVTFDWIASGMASLGFIAQDLETVLPTLVTEDAD
GIKGVQYGPVVALLVEALKDADARIGRLEGRV