Protein Info for A4249_RS07305 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: UPF0262 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 155 PF06793: UPF0262" amino acids 5 to 154 (150 residues), 214.2 bits, see alignment E=4.8e-68

Best Hits

Swiss-Prot: 57% identical to Y2197_PHEZH: UPF0262 protein PHZ_c2197 (PHZ_c2197) from Phenylobacterium zucineum (strain HLK1)

KEGG orthology group: None (inferred from 84% identity to bsb:Bresu_2245)

Predicted SEED Role

"FIG00450475: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HYG1 at UniProt or InterPro

Protein Sequence (155 amino acids)

>A4249_RS07305 UPF0262 family protein (Brevundimonas sp. GW460-12-10-14-LB2)
MSADHKLASVELDAATLPAATAEIEHERRVAIFDLVEKNSFEPVGAEGGPYRLKLSLQDN
RLVFDIDGENFTRTYAISLTPLKGVIKDYLMICDSYYEALRGSSASQIESVDMGRRGLHN
EGAEQLKTRLDGKIVVDHETSRRLFTLLCALYRRG