Protein Info for A4249_RS04800 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: fused MFS/spermidine synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 762 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 55 to 76 (22 residues), see Phobius details amino acids 87 to 106 (20 residues), see Phobius details amino acids 119 to 141 (23 residues), see Phobius details amino acids 161 to 181 (21 residues), see Phobius details amino acids 193 to 213 (21 residues), see Phobius details amino acids 240 to 260 (21 residues), see Phobius details amino acids 266 to 285 (20 residues), see Phobius details amino acids 294 to 313 (20 residues), see Phobius details amino acids 319 to 341 (23 residues), see Phobius details amino acids 353 to 375 (23 residues), see Phobius details amino acids 379 to 380 (2 residues), see Phobius details amino acids 402 to 420 (19 residues), see Phobius details amino acids 440 to 457 (18 residues), see Phobius details amino acids 463 to 480 (18 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 68% identity to bsb:Bresu_1779)

Predicted SEED Role

"FIG00449785: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160HY37 at UniProt or InterPro

Protein Sequence (762 amino acids)

>A4249_RS04800 fused MFS/spermidine synthase (Brevundimonas sp. GW460-12-10-14-LB2)
MTEAIDPLRPAAPTSDRIAPILFAVAIFTSACLVFVVQPMAAKLLLPTLGGSPSVWNASM
VFFQTALLAGYGYAHLLQRLATMRAQVGVHLGLLIVAAFFLPLQISGLLGDPEPSQPAMW
LLATLAVSIGAPFAVLSATAPLLQAWYARVRAGHADGQNPYVLYAASNLGSFLALLAYPV
LIEPLASLSGQRLGWSVGYGVFVVMVVGLGVQVWRRREIGTAEPAPLEASPPIAWREKGM
LVLLAAAPSSLMLGVTAHLTTDVASAPFLWVIPLALYLLTFVIAFQTRPAASPAIGLGLQ
AAAAAACAALIAFRTGEWLLVFTINLAAFFFTALMCHQRLAARRPAPDRLTEFYLLLSLG
GVVGGLFNGLIAPAVFDMVWEYPLVLVAVGLLRPWSRREIRPWEIICCVAGVVIALLGPL
SMEAVRYAPDIRAAIPDAELVRIAQAILGIATLFAFLVRDRAVMFTIVLAAIVWSGYHLA
RGYDWALSERSFFGVMRVANIDDPLMGGPVHVLMHGTTLHGAQAQAPSNRCQPTLYYATS
TPLGQAMLQMQARRLDGARVGVVGQGSGAMAAYKRAQDQLTFFEIDPMVDRLSRDPQWFS
FINGCADGPVRTVLGDARLTMDREPAGSYDLLVIDAFSSDAVPTHLLTVEAIRGYLRLLA
PDGVVVLHLSNRNLEITLPAEAAAQALKVPNLHQVYIEQSGQGDMAEASTEALLIGRSPA
ALEGFRDDARWRKLSPTTVRPWTDDYVNLFGSLVRQMKMAAR