Protein Info for A4249_RS00810 in Brevundimonas sp. GW460-12-10-14-LB2

Annotation: glycosyltransferase family 4 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 363 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details PF13439: Glyco_transf_4" amino acids 61 to 159 (99 residues), 39.3 bits, see alignment E=1.8e-13 PF20706: GT4-conflict" amino acids 165 to 288 (124 residues), 29.4 bits, see alignment E=1e-10 PF00534: Glycos_transf_1" amino acids 169 to 326 (158 residues), 60.8 bits, see alignment E=3.2e-20 PF13692: Glyco_trans_1_4" amino acids 172 to 314 (143 residues), 55.8 bits, see alignment E=1.6e-18 PF13524: Glyco_trans_1_2" amino acids 264 to 344 (81 residues), 39.4 bits, see alignment E=1.4e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A168N021 at UniProt or InterPro

Protein Sequence (363 amino acids)

>A4249_RS00810 glycosyltransferase family 4 protein (Brevundimonas sp. GW460-12-10-14-LB2)
MRTAILLPPGCLFSKAQPNSMETVVRTMAGADQGGETRIFCCQGANDGVSTAVDALPAGR
IRMPTLIERLRAFRPDVIEHHQQVKQALAVQQALADTPHLLYRHNALRAPRHPIDRWRYR
ARYERLDGLVFVSVAERDAFVRTFPDLHDRAFAVPNPIDAGAWLASPEDRQPVIAFAGRA
MPEKGVDALCAALPAVLDAHPDWRAVLMLNDWDDHVRWAARHVAPLERYGGRVEVLKSAP
LAEVRRRMQTAAIALTPSVWDEPFGLTAIEAHAAGAALISSGRGGLREASGPHAVYIDAV
TPKTLSAAMDRLISSPEERLALARFAQAYVLATHTPERRAAELAAVRQTAIDRRRARQTT
GIA