Protein Info for b3744 in Escherichia coli BW25113

Name: asnA
Annotation: asparagine synthetase AsnA (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 330 TIGR00669: aspartate--ammonia ligase" amino acids 1 to 330 (330 residues), 665 bits, see alignment E=1.1e-204 PF03590: AsnA" amino acids 9 to 244 (236 residues), 308.2 bits, see alignment E=2.1e-96

Best Hits

Swiss-Prot: 100% identical to ASNA_ECOBW: Aspartate--ammonia ligase (asnA) from Escherichia coli (strain K12 / MC4100 / BW2952)

KEGG orthology group: K01914, aspartate--ammonia ligase [EC: 6.3.1.1] (inferred from 100% identity to eco:b3744)

MetaCyc: 100% identical to asparagine synthetase A (Escherichia coli K-12 substr. MG1655)
Aspartate--ammonia ligase. [EC: 6.3.1.1]

Predicted SEED Role

"Aspartate--ammonia ligase (EC 6.3.1.1)" in subsystem Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis (EC 6.3.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See P00963 at UniProt or InterPro

Protein Sequence (330 amino acids)

>b3744 asparagine synthetase AsnA (NCBI) (Escherichia coli BW25113)
MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVK
ALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWE
RVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDL
DAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWN
PVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLELEWHQALLRGEMPQTIGGGIGQSRL
TMLLLQLPHIGQVQCGVWPAAVRESVPSLL