Protein Info for UW163_RS24055 in Ralstonia solanacearum UW163

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1038 PF03432: Relaxase" amino acids 53 to 232 (180 residues), 28 bits, see alignment E=1.7e-10 PF18821: LPD7" amino acids 880 to 965 (86 residues), 59.4 bits, see alignment E=2.9e-20

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1038 amino acids)

>UW163_RS24055 hypothetical protein (Ralstonia solanacearum UW163)
MLIRVRGHNDGIKKYLEKGQKHDREFARDEMDERVILAGDLDLTDALIQSIATDAERYLH
ITLSFKEDELSREVLAEITRDFEAFMFSAFRPGEYNFYAEAHVPKLKSYADRKTGELVER
KVHIHVVVPSENLLTGRRLNPFGKVEQQTRFLEAFQEHVNAKYGLASPRDNRRVAFTDAS
EMLSRYKGDAFDGANRELKAAILDAMLARDIVRYEDFRALLTEFGQTRTRNAGRGEEYEN
VKPPGAAKGVNLKEYVFSREFIELSAEGKRASMEARVHAEYVVPGVPRATPGVFREALAE
WHTVRAREVKYLNSGSPFYKIYRNAPADEQRQLLAEREFQFYQPYGGMHGEAVDRRERAG
FDERDAWRWAERGHRRGWGDPRPGPGHERGAQAQRQGERDRGIGHGRGGLDVDGYRTIAP
PGSADRVRGLPFGGVDGHEARAQELLPVDPLLELGVEQTERADALRRPGDFPGAGAEGRS
VGLSAEDLAWQFAATRMYDTYQSGDPDEQARLRAASAAKFTQYRFDPPPGAGGTPAPFGQ
LPGPRNLADIPSFDAIGSMPFAPTPATTAINAINRQSAASTIPPDRLQLPASWPAPSGDL
DAPFNSRARAATGREADTVLDQLARDLAEKRATGGDIERAEFREIKANLDAQRLLEALAS
SHGLIVEKYAITKGADGGDRIRAGTRNLNVSDFLTKELNLPWADAAHLLRTTYRAQTGRD
VSPQRPDPTPAMWREFMLQRSSFGQADRAAWAGQLQSERERREGIRSAFRVARSAIAEDP
KLSRAQSKAALSTTRMTRVERDTALSRAITAERDALRAARPSLEERYLAYLAARGQRGDH
AALFELRRLRQDEPSSDTHRLTIRPAKPIQPNGIFYEGPAITHQVQRNGDVEYKRNGDAL
LVDQGVSVRLWQNDRDAIEIALRLAQQKFGPVLELTGPLDFQQEAARVAAAARLNVEFAD
VAINRIFVEHKHALAGADAANRRQEREREGLSWKNPAPSLGRSTESQRPSRDRGDTPHDQ
PLPDAQAPDRDPGPEMER