Protein Info for UW163_RS23705 in Ralstonia solanacearum UW163

Annotation: DUF4338 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 413 PF14236: DruA" amino acids 45 to 338 (294 residues), 280.8 bits, see alignment E=6.3e-88

Best Hits

KEGG orthology group: None (inferred from 75% identity to nwa:Nwat_3173)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (413 amino acids)

>UW163_RS23705 DUF4338 domain-containing protein (Ralstonia solanacearum UW163)
MPSGGATVVGVNPREANLKRKLRAHLRSLGFTRSEAGVLQAPDTGKGAIRSLHRAQRQER
LSANQAFIARRGASLMRYFASGSEVEPQRISPVLERVSSGSQHGDLFRLAALSWSVPVSN
GFGRRLRYLVWDQHNGKLIGLIAIGDPVFNLAVRDKFIGWDTHDRSARLVNVMDAYVLGA
LPPYNALLGGKLVACLLRSRDLYDDFARVYGSTTGVISQEEKKARLLAITTTSSMGRSSV
YNRLKLDGIPYLEPIGYTGGWGHFHIPDRLFGELRDYLREIDHTYADQHAFGQGPNWRLR
TTRAALAALGFKDDLLKHGIQREVFISRLARNATGILQTGKGRPDVAGLLSAREIAGLAL
ERWMMPRATRMPAYRDWTTEHLIDLFGSQARLLRTQVNASYLASRPLRSAVGF