Protein Info for UW163_RS21365 in Ralstonia solanacearum UW163

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 523 transmembrane" amino acids 32 to 61 (30 residues), see Phobius details amino acids 67 to 88 (22 residues), see Phobius details amino acids 100 to 123 (24 residues), see Phobius details amino acids 131 to 150 (20 residues), see Phobius details amino acids 161 to 182 (22 residues), see Phobius details amino acids 188 to 208 (21 residues), see Phobius details amino acids 220 to 241 (22 residues), see Phobius details amino acids 251 to 269 (19 residues), see Phobius details amino acids 289 to 311 (23 residues), see Phobius details amino acids 324 to 344 (21 residues), see Phobius details amino acids 356 to 374 (19 residues), see Phobius details amino acids 380 to 403 (24 residues), see Phobius details amino acids 421 to 443 (23 residues), see Phobius details amino acids 485 to 504 (20 residues), see Phobius details PF07690: MFS_1" amino acids 39 to 431 (393 residues), 185 bits, see alignment E=2.9e-58 PF06609: TRI12" amino acids 56 to 466 (411 residues), 24.2 bits, see alignment E=1.8e-09 PF00083: Sugar_tr" amino acids 69 to 201 (133 residues), 55.7 bits, see alignment E=6.3e-19

Best Hits

KEGG orthology group: None (inferred from 92% identity to rsl:RPSI07_mp1290)

Predicted SEED Role

"FIG00975300: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (523 amino acids)

>UW163_RS21365 MFS transporter (Ralstonia solanacearum UW163)
MPSRAAADIRQPDPMLSSAESRAAPPAPEIPVMVVMGGLMLAILLGALEQTIVVVALPAI
AGQLDGFALMGWVVSAYLVASTVVTPIYGKLSDLYGRRAMLSTAIVLFVLASVACAMATS
MPMLLVARALQGLGGGGLISVAQATIADVVPLRERGRYQGYVSGMWAMASLAGPVIGGYL
THYLSWRWIFWINLPVGLVALAVARRTLRHLPVTYQRRPIDVAGVLLFAVGLTALLVMIT
RVGQGVPFAQADNLGLLAVSVLVLGAFVWQENRAAEPIIPLSMFRVQTVTLCCLALFLCF
FQLIATSVLMPLRFQMVAGAGPDIAALRLVPFTLATPAGAFVAGKWMTHSGRYKPLMVGG
ACVVPFAVAALGLLDPHNVWALTLAMMVLGLAIGVQFPTGLVATQNAVPPQNVGLATALT
AFSRLLGGAVGVAVLTSVLIALLRQAAPQTQAMAGSDLLMDLFHAALASKGADALALRSM
GESAFRHLFFFAAAVSVISPLMLVRLEEKALRGKVPAAQAVVD