Protein Info for UW163_RS20470 in Ralstonia solanacearum UW163

Annotation: fructosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 476 TIGR01322: sucrose-6-phosphate hydrolase" amino acids 11 to 445 (435 residues), 464.2 bits, see alignment E=2.1e-143 PF00251: Glyco_hydro_32N" amino acids 21 to 320 (300 residues), 325.1 bits, see alignment E=5.7e-101 PF08244: Glyco_hydro_32C" amino acids 335 to 469 (135 residues), 57.8 bits, see alignment E=1.4e-19

Best Hits

KEGG orthology group: K01193, beta-fructofuranosidase [EC: 3.2.1.26] (inferred from 87% identity to rsl:RPSI07_mp1101)

Predicted SEED Role

"Sucrose-6-phosphate hydrolase (EC 3.2.1.B3)" (EC 3.2.1.B3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.26 or 3.2.1.B3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (476 amino acids)

>UW163_RS20470 fructosidase (Ralstonia solanacearum UW163)
MLDDVLAPLDVIEDPWRQAYHLCPPLGLLSDPNGLTFWRGAYHVFYQWNPHGCGHENKHW
AHVRSTDLIHWEWLPPALAPDAPYDEDGCYSGCAVELGGDLFLMYSGNVRSADGGRESYQ
CLARSRDGVGFEKLGPVINGALPGYTGHFRDPKAWRHGDRWYAVLGAQRNDLTGTVLLLE
SPDLCEWHSVGELIQPAPPCYMYECPDLFTLDGRTVLVCCQQVLEASADGTRRSDVAGYM
LGWVDLERARFPHSGFHKLDQGFDFYAPQTLLGPDGRRLLIGWMGLPVQPQTPSVDSGWT
HCLTLPRELTLEGDQLMQRPARELARLRSMAIRVPDVDMDANTAFVLPQPDGGAWELDLS
IRAARGADWVLHLFDSEQQSLSLVFDGAGGRLTLQRHCPAAGQLHESRTCEMGGAVTRLQ
VFIDRSSAEIFVNDGVAVFTTRCYPTARPEAPRLLARQALTLHDIHVWPLEDRLTR