Protein Info for UW163_RS20125 in Ralstonia solanacearum UW163

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 414 transmembrane" amino acids 7 to 29 (23 residues), see Phobius details amino acids 37 to 55 (19 residues), see Phobius details amino acids 75 to 92 (18 residues), see Phobius details amino acids 98 to 123 (26 residues), see Phobius details amino acids 135 to 157 (23 residues), see Phobius details amino acids 163 to 184 (22 residues), see Phobius details amino acids 205 to 227 (23 residues), see Phobius details amino acids 246 to 266 (21 residues), see Phobius details amino acids 275 to 295 (21 residues), see Phobius details amino acids 301 to 324 (24 residues), see Phobius details amino acids 336 to 356 (21 residues), see Phobius details amino acids 363 to 382 (20 residues), see Phobius details PF07690: MFS_1" amino acids 29 to 349 (321 residues), 37.4 bits, see alignment E=7.5e-14

Best Hits

KEGG orthology group: K05373, MFS transporter, putative signal transducer (inferred from 64% identity to vei:Veis_2436)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (414 amino acids)

>UW163_RS20125 MFS transporter (Ralstonia solanacearum UW163)
MKRYLPYWSYYAHQGMVSALTMQGVVGYFRHAGADLAQLSWLSLAMLPWVGKFLWAPWCE
RHALPLRGNRYQGSLVLLQLGMAATIAGIGFLSPTHAAGAIVAALTLLSLLSSSHGIYAN
GIAICATDARSRPLANVAQVGGSYLGIPLGSFVFLTIAERAGWRFGFAGIAALSLLLLIP
PLLVRQPMQAAPAGSARPRLDWRNLRGIAPALTLTVLYLIAMRGLMALQTVLLVDAGLSL
SALGEAVTVYSTLASGIGIAIGGWAARRFGAWRGLMPVMLSFPLIAGVLATGYPHFGAQA
WTLAFGVVNVAAAVGFVTLYNVLMGLTRAHQPASDYALFQSTDMAVGMLTSMAVLRLSHD
TGYRPVLALIALLGVASLWPAIRLCRRLAGSPAASPAHVPSPTAHEPSLETVHG