Protein Info for UW163_RS16285 in Ralstonia solanacearum UW163

Annotation: enoyl-CoA hydratase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 283 transmembrane" amino acids 125 to 137 (13 residues), see Phobius details PF00378: ECH_1" amino acids 30 to 282 (253 residues), 142 bits, see alignment E=2.2e-45 PF16113: ECH_2" amino acids 34 to 251 (218 residues), 85.5 bits, see alignment E=5.3e-28

Best Hits

KEGG orthology group: K01692, enoyl-CoA hydratase [EC: 4.2.1.17] (inferred from 95% identity to rsl:RPSI07_mp0051)

Predicted SEED Role

"Enoyl-CoA hydratase (EC 4.2.1.17)" in subsystem Acetyl-CoA fermentation to Butyrate or Butanol Biosynthesis or Isoleucine degradation or Polyhydroxybutyrate metabolism or Valine degradation or n-Phenylalkanoic acid degradation (EC 4.2.1.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 4.2.1.17

Use Curated BLAST to search for 4.2.1.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (283 amino acids)

>UW163_RS16285 enoyl-CoA hydratase (Ralstonia solanacearum UW163)
MNDRIDPALLAGNRRPLAGYQATHFLWRVQGNVATVTLNRPERKNPLTFDSYAELRDLFH
QLKWADDVKAIVLAGAGDNFCSGGDVHEIIGPLVQLKAPELLMFTRMTGELVKAMRACSQ
PIVAAVDGVCAGAGAILAMASDLRLGTARSKTAFLFNRVGLAGCDMGACAILPRIIGQGR
ASELLYTGRAMSGEEGERWGFFNRLCDPAEVLAQAQALAADLAAGPTFANGITKTMLHQE
WTMTIEQALEAEAQAQAICMLTEDFGRAYHAFAARQKPVFEGN