Protein Info for UW163_RS15315 in Ralstonia solanacearum UW163

Annotation: MCE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 517 transmembrane" amino acids 7 to 29 (23 residues), see Phobius details PF02470: MlaD" amino acids 32 to 123 (92 residues), 43.8 bits, see alignment E=1.3e-15 amino acids 147 to 206 (60 residues), 35.6 bits, see alignment E=4.5e-13 amino acids 278 to 379 (102 residues), 31 bits, see alignment E=1.2e-11

Best Hits

KEGG orthology group: None (inferred from 97% identity to rsc:RCFBP_11538)

Predicted SEED Role

"Paraquat-inducible protein B" in subsystem Oxidative stress

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (517 amino acids)

>UW163_RS15315 MCE family protein (Ralstonia solanacearum UW163)
MTKAGAAYLWLVPVLAVLIGMAGLLWFAYEGGPEITISFLDAEGLESGRTPVRFKDVEVG
TVTAVHPSHDHKRVLASVRLTKAAANVAVKDTRFWIMRPRVETRSVSGIGTLRSGTYVGV
DSGLSREAASAFTGLENPPAVPQAQQGARYRLHARSLGSIEVGSPVYYGHLDVGQVTATD
LAPDGKGVSIEVFVEAPYHRYVSAQTRWWNAGGGSSSRDAQGFPSGMQSLTAMLLGGLAF
QSPPGPSRNQAAPAGTAFELAEDGPAVPEPPAGAPAVVVMRFAQSLRGLSVGAVVDFRGL
AFGEVTKIGIEHAVGKREPAMLVTMNLYPDRLGQPFRDSAEHADAAAGEALLRKLVADGL
RGQLRTGNLLTNQLYVALDLFPNTPPVRLDLNRSPVELPTVPNTLDDLRAAIGEIMKTLD
RAPFGPVGTELSRSFVQARRLFKLLDAQLAPRARETLATAKQGVDEAEAALNPSPSLQTD
LQPTQERLARAQQTLETLAKTIEQRPETVVWGKTPVS