Protein Info for UW163_RS15205 in Ralstonia solanacearum UW163

Annotation: DUF2069 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 130 transmembrane" amino acids 17 to 37 (21 residues), see Phobius details amino acids 43 to 61 (19 residues), see Phobius details amino acids 68 to 86 (19 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details PF09842: DUF2069" amino acids 18 to 117 (100 residues), 124.8 bits, see alignment E=7.6e-41

Best Hits

KEGG orthology group: None (inferred from 98% identity to rsc:RCFBP_11553)

Predicted SEED Role

"Probable transmembrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (130 amino acids)

>UW163_RS15205 DUF2069 domain-containing protein (Ralstonia solanacearum UW163)
MTPADASVPHSRALHRLSAGSLIALIALCAAWELWLAPLRPGGSWLALKALLLAWPLPGV
LRRNRYTMQWASMFILLFFTEGIVRATSDASASRALAWAEVALSLVFFFATIFYLRPFKR
AAKARARQDA