Protein Info for UW163_RS13960 in Ralstonia solanacearum UW163

Annotation: muramoyltetrapeptide carboxypeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02016: Peptidase_S66
  • amino acids 4 to 125 (122 residues), 69.3 bits, E=3.4e-23
• PF17676: Peptidase_S66C
  • amino acids 174 to 289 (116 residues), 121.8 bits, E=2.5e-39

Best Hits

KEGG orthology group: K01297, muramoyltetrapeptide carboxypeptidase [EC: 3.4.17.13] (inferred from 99% identity to rsc:RCFBP_11896)

Predicted SEED Role

"Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)" (EC 3.4.17.13)

MetaCyc Pathways

• peptidoglycan recycling II (8/10 steps found)
• peptidoglycan recycling I (10/14 steps found)
• muropeptide degradation (1/4 steps found)
• peptidoglycan maturation (meso-diaminopimelate containing) (4/12 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.17.13

Protein Sequence (308 amino acids)

>UW163_RS13960 muramoyltetrapeptide carboxypeptidase (Ralstonia solanacearum UW163)
MTTVRLIAPSGYPNDSAIAERGLVFLQGQGCTVVNPACLARQHQRFAGGELARLADLHQI
GTGSGQEIAMAIRGGYGLTRLLERIDFIGIGRRAQATDAIIVGHSDFTAFSLAYLAATGG
VTFAGPHVCSDFGLETVDPFMVEHFWGILRNPAYTLRVDAPQSGDCARPGRYAGTLWGGN
LAMLCSLLGTPYLPDIRDGILFVEDINEHPYRVERMLLQLQQAGVLDGQQALVLGDFSGY
KTTPYDAGYDFDAMLAYLAEHLSIPVVSGLPFGHCPTKATLPIGAQAELDVDADGFTLHL
SGYPTLRG