Protein Info for UW163_RS09090 in Ralstonia solanacearum UW163

Annotation: sulfate adenylyltransferase subunit 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 435 TIGR02034: sulfate adenylyltransferase, large subunit" amino acids 11 to 431 (421 residues), 530.1 bits, see alignment E=2e-163 PF00009: GTP_EFTU" amino acids 11 to 205 (195 residues), 135 bits, see alignment E=5e-43 PF03144: GTP_EFTU_D2" amino acids 260 to 319 (60 residues), 33.5 bits, see alignment E=9.6e-12

Best Hits

Swiss-Prot: 50% identical to CYSN_CHRVO: Sulfate adenylyltransferase subunit 1 (cysN) from Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)

KEGG orthology group: K00956, sulfate adenylyltransferase subunit 1 [EC: 2.7.7.4] (inferred from 98% identity to rsc:RCFBP_11005)

Predicted SEED Role

"Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)" in subsystem Cysteine Biosynthesis (EC 2.7.7.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.4

Use Curated BLAST to search for 2.7.7.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (435 amino acids)

>UW163_RS09090 sulfate adenylyltransferase subunit 1 (Ralstonia solanacearum UW163)
MTNQASHQGLLRFITAGSVDDGKSTLIGRLLYDSKAVLTDQLQALANAKNKRTAGEQIDF
SLLTDGLEAEREQGITIDVAYRYFSTARRKFIIADTPGHEQYTRNMVTGASTAHAAIILI
DATRVTTQNGKTELLAQTKRHSAIVKLLELQHVIVAVNKMDLVDYSEARFNEIRTAYDAL
AAQLGLRDVRYVPVSALRGDNIVHASEAMPWYQGEPLLALLEDLKVEDTAPVGDDALRFP
VQFVARQDGSQADDFRGYMGRVEAGTVRVGQAVRVLPANRETVVAEVLTPNGAADSAGPG
ETVTVRLADDVDISRGDTIVAAPTTAANAAKKLQADLCWFDEHELNPSRKYVLKHTTATV
FARVSEVERVLDVHTLSHETGRKQIALNDIGTVHISLQKPIVCDAYGDNPATGAFILVDE
ATHHTVAAGMIRAFS