Protein Info for UW163_RS05860 in Ralstonia solanacearum UW163

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 428 transmembrane" amino acids 21 to 38 (18 residues), see Phobius details amino acids 91 to 112 (22 residues), see Phobius details amino acids 120 to 142 (23 residues), see Phobius details amino acids 148 to 167 (20 residues), see Phobius details amino acids 174 to 197 (24 residues), see Phobius details amino acids 208 to 228 (21 residues), see Phobius details amino acids 247 to 271 (25 residues), see Phobius details amino acids 277 to 297 (21 residues), see Phobius details amino acids 304 to 325 (22 residues), see Phobius details amino acids 337 to 356 (20 residues), see Phobius details amino acids 363 to 382 (20 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 91% identity to rsc:RCFBP_10318)

Predicted SEED Role

"FIG00978490: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (428 amino acids)

>UW163_RS05860 hypothetical protein (Ralstonia solanacearum UW163)
MHLDATTASAEKPKLKLDEHRTLLLGILFIGLLLWRSPNLFLHPRFWAEEGQFYYSTLQN
GTSPLTLVMRGNYQLITNLICYVATLVPTEWAAHVTTYSSLLVALWCIILFSRFSIENGW
PLTTAAIAVAIFALCAQGYEVYLNTTNVQWLCALSLLFIGIAPWVNLRGIRKALLYAWVA
TCALSGVPSTIMAPLFLIKGTVFRSAIHFRLGLILAIGTAIQVTVIILHPHPDRLFSPTA
LAMTAPWLLQTVASPIFTGGLTEFLIFFLHWLQSGPALTMAYVVLVSIAVFALVASYREA
KDKATVIVLALVWIFVPITQSLGALGDTHKLISGWMHGRYFFIGVVCFITLLGIAANRTS
PVVRRTAMSLLLMALCAGLYQTRHGAWKTYMLDGPSWSDQVAACEGHRPCQVQAWPAGPD
WTFMLYRK