Protein Info for UW163_RS02290 in Ralstonia solanacearum UW163

Annotation: membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 833 signal peptide" amino acids 1 to 41 (41 residues), see Phobius details transmembrane" amino acids 265 to 281 (17 residues), see Phobius details amino acids 288 to 309 (22 residues), see Phobius details amino acids 315 to 336 (22 residues), see Phobius details amino acids 356 to 379 (24 residues), see Phobius details amino acids 385 to 404 (20 residues), see Phobius details amino acids 434 to 452 (19 residues), see Phobius details amino acids 671 to 689 (19 residues), see Phobius details amino acids 696 to 716 (21 residues), see Phobius details amino acids 722 to 741 (20 residues), see Phobius details amino acids 761 to 782 (22 residues), see Phobius details amino acids 788 to 807 (20 residues), see Phobius details PF03176: MMPL" amino acids 181 to 437 (257 residues), 62.6 bits, see alignment E=1.6e-21

Best Hits

KEGG orthology group: None (inferred from 97% identity to rsc:RCFBP_21055)

Predicted SEED Role

"FIG021862: membrane protein, exporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (833 amino acids)

>UW163_RS02290 membrane protein (Ralstonia solanacearum UW163)
MQARSSTDSAAHSLRALRRPAVLVWLLGLLACLAVIGRTSFVADLSAFLPRSPSAEQRVL
VDQLRDGLVSRLMLVAIEGGEPQMRAELSRRMAATLRGDARFASVSNGEPVGKERDQRFV
FDHRYLLSPAVTPQRFSPDGLHQALGDSLDLLSSSAGLVAKAMLPRDPTGEVATLVGQLD
SSAQPPSSHGVWVSRDGRRAVLVAQTAGAGSDTDAQALAMAAVRGAFEAAARAVPDATAC
RLLMTGPGVFAVDARDTIRHDVERLSTLSLVLIVALLFVVYRSPRMLALGLLPVLTGVAA
GVASVSLAFGTVHGLTLGFGTTLIGEAVDYSIYLFVQSAQPHARREDAMRDWIADYWPTI
RLGVLTSVCGFASMLFSGFPGLVQLGLYSIAGLTTAALVTRFVLPHLHAGRVAIRDVSRL
GGALARAARAAPRLRWPLAVLLIAACATLALHRDRLWNRELAALSPVPAQSQALDARLRA
DIGAPDVRYLVVISGASEQAALEGAEKVSAQLQPLVDAGMLGGYDSPARFLPSEAAQRAR
LTSLPPAAVLAARLRTAVVDQPIQVKPELFAPFLADVEAARRQPLLTRADLRGTSMALAV
DALLTERAGRWSAMLPLRAPADAQTRTADTPSLDAAQVRGAVERAGVPDALFIDMKAEAD
RLYVNYVREDIRLSLAGVAAIALLLLLALRSAQRAMLALAPLAAAVLVVGAGFALAGVPL
TILHLVGMLLIVAVGSNYALFFSRRTDASADAQPVTPQTLVSLLIANLATVAGFGLLALS
HVPMLETFGLTVGPGAILALLFAAILAPSAPSAPSTTWTAAHAPAHPRHGDPA