Protein Info for UW163_RS02255 in Ralstonia solanacearum UW163

Annotation: glycosyltransferase family 2 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 257 transmembrane" amino acids 151 to 173 (23 residues), see Phobius details amino acids 228 to 248 (21 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 11 to 126 (116 residues), 28.9 bits, see alignment E=1.1e-10 PF00535: Glycos_transf_2" amino acids 12 to 139 (128 residues), 64.7 bits, see alignment E=1e-21

Best Hits

KEGG orthology group: None (inferred from 98% identity to rsc:RCFBP_21048)

Predicted SEED Role

"FIG143263: Glycosyl transferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (257 amino acids)

>UW163_RS02255 glycosyltransferase family 2 protein (Ralstonia solanacearum UW163)
MSTPRASSTHLVLIPSYNPGIKVDDTVRSARAHWNPVWVVVDGSTDGSTARLQAMAERDP
GLHVMVLPRNRGKGVAVLAGLEAAAARGFTHVLTMDSDGQHPADLIPAFMAASQAAPGAM
VLGQPRFDASAPQLRVQGRRLSNVCTDIETLWAGIGDSLFGFRVYPVAPLVAIMRRQRRW
MRGFDFDPEAAVRLCWAGVRPIRRDAPVRYFRAAEGGVSHFHYGRDNVLLVSMHLRLLFG
SLWRLPLLLARRLKPGA