Protein Info for RPSI07_RS19825 in Ralstonia solanacearum PSI07

Annotation: glycosyltransferase family 1 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 437 PF00534: Glycos_transf_1" amino acids 245 to 388 (144 residues), 70.9 bits, see alignment E=1e-23 PF13692: Glyco_trans_1_4" amino acids 246 to 385 (140 residues), 54.1 bits, see alignment E=2.1e-18

Best Hits

KEGG orthology group: None (inferred from 100% identity to rsl:RPSI07_2507)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (437 amino acids)

>RPSI07_RS19825 glycosyltransferase family 1 protein (Ralstonia solanacearum PSI07)
MKRWLEQARAAVHVPAFVERRRVPLARARLSQACHADTAAPGQKQLLVDISVIARHDART
GIQRVVRAVLGQLLASAPAGYAVRPVAASRRRPYRYAAWEEAGVEADPTQDIAIRPGDIF
LGLDLAAHIVPVHRHQLAGWKARGAALHFVIYDLLPLQHPEWFPARLVVAFRRWLRAVAV
LADNAICISHVVESELIDLLEHRYGLPPGCVGTRVVPMGWDVASTQPSRGLPPDFDALLS
RIRQHKTTLMVGTLEPRKGHAQILDAFEQLWHSGKDYNLVIVGRPGWKTDGLQARLRRHP
QGGQHLFWLDNASDEALLALYDACDGVVNASYGEGFGLPMIEALGRGKSVLARDLPVFRH
AVHSGVEYFSAQDPGELPRVIATWLEQTTTSTTQSVLAHRMPVWRDTVSALIAGFDAAGG
ESGGTGPVPEKQWLGAA