Protein Info for RPSI07_RS16575 in Ralstonia solanacearum PSI07
Annotation: type III effector protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
KEGG orthology group: None (inferred from 100% identity to rsl:RPSI07_1851)Predicted SEED Role
"FIG00974765: hypothetical protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (2451 amino acids)
>RPSI07_RS16575 type III effector protein (Ralstonia solanacearum PSI07) MERKRRRDFDESADARIASRPRLEDPSAAHPAASRASSRVGYDGGPANNQLVDYERWLDS SDLKLLRSQREQQCERLSRLVKTSFRRKVDPQSCLRLARENVLAQHNGYGLALVFLHRSV PAEENTRRLVDYLLVLSKVMFQTKPRGRGDLGRCADLAAHYLFKTNWFEETPLHRLADLG NLLSKYPNRPACIEATAWIADQVMKPGRLPKLNGKQLALLANAFSKHTGRAQCERAVARL ASQLLHEPIEAFAAQGVTLLLNALSKWPGNAACRTAAEHLAARLARDDRLRQAMSAQEVA SALNALSKWPDADACRTAAEHLAARLDKDGGLVRAMDAQGVANALNALSKWPDARACRRA AGPLAVRLAKDAGLRQAMNAQGVANALNALSKWPDADACRVAAEHLAARLAKDDRLRRAM SAQHVANALSALSKWPAADACRTAAAHLAARLAVDAGLRQAMDARGVSNALNALSKWPET VACRMAAEQLADRLTEDAGLRQALDAQGIANALSALGKWPESDACHAATGYLAALLVKDD RLRQALSAQEVANALNGLSKWPESDACRAAAEHLAARLAEDAGLRQALDAQEIANALNAL GKWPESDACHTAAGHLAALLVKDDRLRQALNAQEIANALNGLSKWPETDACRTAAEHLAA RLAKDDRLRQAMSARQVAYALNALSKWPDAGACRAVAEHLAARLDNDAGLLQAMTARGIA NTLNALSKWPDSVDCRKTAVSLAALLSEDAGLRQAMDAQGIASVLNALSKWPESDACRAA AEHLAARLDKDAGLRQAMRAQQVANTLNALSKWPETGACRAVAEHLAAQLAADAGLRQAM NAQGIANTLNALSKWADNALCREAAVALVDALGTGGRLFGTFGMRALAQLANGMARIALT MKDAMAQDNDAEQPDSTTLALMHARLRELAAHLNVRPGGLNDAGTRSIAMIFKALSSTGL KDGLKLLAHQGLQRLQALHTQTHFKPDDLETLGTLAAGLLPLVRAPELKPYRSTALHLLE QTQPDVARKIQDYAEVHLASAGTATATRSPEGGAFGTRCPGLTFFLLLKTYAVVADMWKL RNVPGDPARVVQRREELKAWVGNTLERVRGRIEEDLDEMSWNLIAQIEAGDHVLDALDLM LWRDLDKIVAAHQPTSLDVAAVRRELRALPEVRDLTGSEAGAATLQIIDMRGRNVRSGAD AGAQYSFFTRLTGGKLPLVEVELPGKLSAFMLARTIRRGGDLLRMDLFGGSHLTPQSVRV FERLAEAQSIKRYGRIPVVRLADTVPDAPLMRDVIRKLNPQREDWYRMQRALLEVVPRDH VVEGPVRLALLADRPHGAAPAFALRTSTGEPIHLASHDGCGFIRESLARRIPAMAQAMDA WQLASQKGTEALPTQRPSILPAQATHHYPRNEAAIEEARGHLRRALYEDATLWETDAFSG ARRLSKPKLYDLLIAGGIRGVQGVAVPSADDKLYLPGTQSAVFDRTGGPVLLGKPPYDKP NLMPVPAERVGTSKQGDATARFLETAFALQYSYTAWDESRSTAAGTDDDAPMLHGKGVTI VVPDALWPQDNDAQWVWSTEDMKVHSSWTQRRERDRLPACMDTVGSLRVKDIFTPGALFA VPIDELGKRDADCDGDKVFVYAGLPKMTQAITAFFAERERRIGRTASFKPPKTASAAFDE TGRYHAGRAAEVLSTVRGRELVQRMSTLQFHFWGQPQALRQRIVEQAIFGTYEGTRRELR RGVRRLLYNPAEVTPAQLHELRERAHLGEQHAQHPVAREAAAALRSQLDAFVHDPQATCE AEAQSPALSPALAQRFTMLAEAYAQARTPRERLAALVGHYPTALLPHPGTTLPTDPLTGT DPARETQLGYVPGAPLETLRNLLTLGVKVGTDAPKAVTQTDVYLKVADRLERALHNEPDR IRLMPYTKGGLLTKLREGLDVHAEQRRLRDNPTLAAGLMEMALEELQERGLIGGAPAPGD VSADTAARLRQLAHSLHTAAAQAEAHMTKMVNHAIRGIGVLRGDAHRLKSEHSLFDKLRR LMHKDRQTPEEAAAAVDDALRYSVVLAPETFVQEYAGILGALDAQGLTRIRVRNSFEKAH AAFRGVNVGFIGRDGDGKTVRLEIQFHTQQTFDLKEHFHDDYKQAQSLHLAGARSEQQQA ALAQARDAFDAVAVPPGCENIMEWDCEPPRTDRQRKAAVATAARTDANEHVERLAAQARM VQREIGPVLEAIGLAVVKHHSVPKHAASIGKKIERYQVLEGLSIEQAAARIRDAMRWVVL LPAQRFAAEFDQARRALEEKGLRVMRISNGFAAAGATYAGLNATLRTASGLDFEMQFHTE DSLRARNTSHRTYRKWQDQEVAIRREQNPVKRLSLQQANARLLQERKASAATVPLPEGVK DIASFSAYQDGAGSQTRSPRQSQRPQTMPAPTRASAIGAQPDRAATRKAGW