Protein Info for RPSI07_RS15290 in Ralstonia solanacearum PSI07

Annotation: phosphoglucosamine mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 447 PF02878: PGM_PMM_I" amino acids 3 to 144 (142 residues), 148.6 bits, see alignment E=1.9e-47 TIGR01455: phosphoglucosamine mutase" amino acids 6 to 446 (441 residues), 590.2 bits, see alignment E=1.2e-181 PF02879: PGM_PMM_II" amino acids 162 to 259 (98 residues), 65.3 bits, see alignment E=1.3e-21 PF02880: PGM_PMM_III" amino acids 263 to 369 (107 residues), 111.6 bits, see alignment E=4.6e-36 PF00408: PGM_PMM_IV" amino acids 378 to 446 (69 residues), 70.1 bits, see alignment E=2.8e-23

Best Hits

Swiss-Prot: 98% identical to GLMM_RALSO: Phosphoglucosamine mutase (glmM) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K03431, phosphoglucosamine mutase [EC: 5.4.2.10] (inferred from 100% identity to rsl:RPSI07_1569)

Predicted SEED Role

"Phosphoglucosamine mutase (EC 5.4.2.10)" in subsystem Sialic Acid Metabolism or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 5.4.2.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 5.4.2.10

Use Curated BLAST to search for 5.4.2.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (447 amino acids)

>RPSI07_RS15290 phosphoglucosamine mutase (Ralstonia solanacearum PSI07)
MSRKYFGTDGIRGRVGESPITPDFVLRLGYAAGRVLAHGSEAHGHGRPTVLIGKDTRLSG
YMLEAALEAGFTAAGVDVLMSGPLPTPGVAYLTRALRLSAGVVISASHNPYYDNGIKFFS
ATGDKLPDETESQIEAELEKPMEYAASDALGRARRIDDAAGRYIEFCKSTFPNDLNLFGM
KIVLDSAHGAAYHIAPHVFHELGADVISIGNQPNGRNINDGYGATAPAKLIEATRQHGAD
LGLAFDGDADRLQVVDKNGRLYNGDELLYVMVQARRAAGQAVPGAVGTLMTNLAVELALK
AQGVDFVRAKVGDRYVLEELKKRGWLLGGEGSGHLLCLDKHSTGDGIISALQVLAALRRS
GQTLEQVLDGVHLFPQKLINVRVERGFDWKAHAALQAALKVSEAELNGKGRVLIRPSGTE
PVVRVMVEAQDAALATKHAEQLAATIR