Protein Info for RPSI07_RS08150 in Ralstonia solanacearum PSI07

Annotation: K(+)-transporting ATPase subunit B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 744 transmembrane" amino acids 80 to 100 (21 residues), see Phobius details amino acids 107 to 128 (22 residues), see Phobius details amino acids 265 to 288 (24 residues), see Phobius details amino acids 306 to 332 (27 residues), see Phobius details amino acids 643 to 662 (20 residues), see Phobius details amino acids 676 to 697 (22 residues), see Phobius details amino acids 717 to 741 (25 residues), see Phobius details TIGR01497: K+-transporting ATPase, B subunit" amino acids 50 to 738 (689 residues), 1074.4 bits, see alignment E=0 TIGR01494: HAD ATPase, P-type, family IC" amino acids 117 to 399 (283 residues), 102.9 bits, see alignment E=1.5e-33 amino acids 419 to 666 (248 residues), 152.5 bits, see alignment E=1.3e-48 PF00122: E1-E2_ATPase" amino acids 152 to 340 (189 residues), 99.6 bits, see alignment E=1.5e-32 PF00702: Hydrolase" amino acids 357 to 592 (236 residues), 94.2 bits, see alignment E=1.4e-30

Best Hits

Swiss-Prot: 96% identical to KDPB_RALSO: Potassium-transporting ATPase ATP-binding subunit (kdpB) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K01547, K+-transporting ATPase ATPase B chain [EC: 3.6.3.12] (inferred from 100% identity to rsl:RPSI07_0058)

Predicted SEED Role

"Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)" in subsystem Potassium homeostasis (EC 3.6.3.12, TC 3.A.3.7.1)

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.12

Use Curated BLAST to search for 3.6.3.12

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (744 amino acids)

>RPSI07_RS08150 K(+)-transporting ATPase subunit B (Ralstonia solanacearum PSI07)
MALRYPESDPVVRTVKHHLDSTDAAAHAAASARTTTHHGGHHPLSAKEVRKLSMLSPALV
KPAIVDSFRKLSPRAQAKNPVMFVVYIGSILTTLLWIMALRGQAEAPAGFILAVSVWLWF
TVLFANFAEALAEGRSKQQAASLRGIKTTVQAKVLADPQRRDRVQSRAATALRRGDVVLI
EAGDMVPGDGEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWVVVRITAN
PGESFLDRMISMVEGAKRQKTPNELALTILLVSLTIILLLATVTLLPYSIFSVEVMKAAG
VTSSPITITVLVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVL
LLDKTGTITHGNRQASRFLPAPGVTVKALAEAAWLSSLADETPEGRSIVTLARQLGEAAV
DEAALAQAQPVFVPFSAQTRMSGINVALGGEAHQIRKGAADAIRTHVTALAGKFPDAVLA
AVEDVARKGGTPLVVSDNDRVLGVVELKDIVKAGIRERFAELRQMGIKTVMITGDNRLTA
ASIAAEAGVDDFIAEATPETKLALIREQQAQGRLVAMTGDGTNDAPALAQADVAVAMNSG
TQAAKEAGNMVDLDSSPTKLIQIVEIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFATT
YPQLAALNVMRLATPASAVMSAVIFNALIIVCLIPLALKGVKYRPLGAAALLRRNLWIYG
LGGLLLPFPGIKLIDMFLAAMGWV