Protein Info for RPSI07_RS05440 in Ralstonia solanacearum PSI07

Annotation: penicillin acylase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 811 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF01804: Penicil_amidase" amino acids 44 to 798 (755 residues), 685.1 bits, see alignment E=8.8e-210

Best Hits

KEGG orthology group: K01434, penicillin amidase [EC: 3.5.1.11] (inferred from 100% identity to rsl:RPSI07_mp1213)

Predicted SEED Role

"Penicillin acylase (Penicillin amidase) (EC 3.5.1.11)" (EC 3.5.1.11)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.1.11

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (811 amino acids)

>RPSI07_RS05440 penicillin acylase family protein (Ralstonia solanacearum PSI07)
MPIRSPLPVMLCAAAALGLAAQAIAKEAPRPATQTITVAGLSRPADILVDRWGVPHIYAG
NEDDGFFAQGFNAARDRLFQIDLWRRRGLGQLSEVFGPAYVEQDRATRLFLYRGDMQTEW
NHYSPDAQRIATRFVAGINAYVDWLAQHPDRLPFEFRKLNYAPAHWAPEDVVRIRSHGLT
RNLQSEVARANVACKASLADDTIRYGLQPAWQTQLPEGLDPCLPADLLKVFTLATQGVRV
TPESLKGVDIDSVRVATAANPEATMEGSNNWVIAPGKSATGRAVMANDPHRAYSAPGLRY
IVHISTPTLDIIGAGEPSLPAVSIGHNGHIAFGLTIFNIDQEDLYVYELDPANPNAYRYK
DGWEPFTVLHETVKVRGADARPVELTFTRHGPVIYVDADRHRAYAVRSAWLQPGMSPYFG
SVGYVRARSFAQFKRAMLNWGAPTENQVYADTRGNIGWVPGGLAPIRPNWDGLLPVPGDG
RYEWAGFWRGDQLPSAYNPKSGYFTSSNEMNLPADYPYRERKLGFEWTNGSRHARIDEVL
ARLDSVSLEDSMRLQNDMVSIPARRLMALLMPLSSSDAGTQAALDLFKGWGATMLADSPQ
AALHEVWLTHHLGRAFKHAVLSKAAADAMGAPDPAVMLDVLEHPQGAERRFGEDPQQAAA
KRDAVLLSSLRDAWADMVKRQGPDPRAWNWGALHHNLNAHPFAAIVDDTMRAKLNVGPTP
EGGSAYTPNQSTYRASDFLQTNGPSFRAVIDVGNWDNSRAVNLPGQSGDPDSPHYRDLAP
MWLTGQYFPLLYSRRAVESATEMRIRLVPAH