Protein Info for RPSI07_RS02000 in Ralstonia solanacearum PSI07

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 614 transmembrane" amino acids 303 to 324 (22 residues), see Phobius details amino acids 343 to 364 (22 residues), see Phobius details amino acids 385 to 403 (19 residues), see Phobius details amino acids 408 to 429 (22 residues), see Phobius details amino acids 435 to 451 (17 residues), see Phobius details amino acids 457 to 479 (23 residues), see Phobius details amino acids 491 to 510 (20 residues), see Phobius details amino acids 516 to 537 (22 residues), see Phobius details amino acids 549 to 567 (19 residues), see Phobius details amino acids 578 to 603 (26 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rsl:RPSI07_mp0452)

Predicted SEED Role

"FIG00974690: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (614 amino acids)

>RPSI07_RS02000 hypothetical protein (Ralstonia solanacearum PSI07)
MTSPLHGPWAVLAIAPTQDARQIKRAYAARLKGVRPDEDAAGFQALREAYEWALAQCDAA
PTRPVVSLQVGLVAPSPEAGPPAEPAGEEAAAEPSPDYTPRRSHEQRIVYRHTPPAAQEV
PASVRGAELWRAFRVALPPQDDDDVSADSAARVEAQLRKALQHPDLVSFDARDAFELAAQ
QVCASECAVGALRLACDSVFRWTHTPMPLRPHERQRWLAATGQAAGDRQYQDVQRLARHS
AAVRHMLESGPPRISLLRFFVPGYLADVRRFLDQLQTKWPQVLQYRLDGASLQAWSEAAH
RAWPTFSGLAGMAALGALGALLFWSTGKRLDVPEWYRDLGATLAWFVTAAIAVLPLVLRV
VYPLWPQAAVQRWQAGLGGRPFDALIWYGVRMIMPVLAFFAAALPPWYAQAVTVALVLTG
LLQAILLLLFERGRILVVFPLAGLFYGALMWEAFKPFYADGFLVLLLTDTVFFGLRDILH
RVYRRDWQHTRARVILLACGAALVPAQLLLARDLPVLAAVFGWGWFIGGCAVVDMFGSAL
ARSKTFGMSYVWLIAMGLLLVYSRLAAHGLAGPDNPVAGILTLQAVVAVLAVLALAGTGW
QAWMTRLRTARQRA