Protein Info for RPSI07_RS01735 in Ralstonia solanacearum PSI07

Annotation: AcrB/AcrD/AcrF family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1067 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 334 to 354 (21 residues), see Phobius details amino acids 361 to 381 (21 residues), see Phobius details amino acids 387 to 411 (25 residues), see Phobius details amino acids 432 to 453 (22 residues), see Phobius details amino acids 459 to 479 (21 residues), see Phobius details amino acids 539 to 558 (20 residues), see Phobius details amino acids 882 to 904 (23 residues), see Phobius details amino acids 911 to 929 (19 residues), see Phobius details amino acids 936 to 960 (25 residues), see Phobius details amino acids 985 to 1005 (21 residues), see Phobius details amino acids 1017 to 1040 (24 residues), see Phobius details PF00873: ACR_tran" amino acids 5 to 1041 (1037 residues), 677.7 bits, see alignment E=1.4e-207

Best Hits

KEGG orthology group: None (inferred from 69% identity to bgd:bgla_2g15690)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1067 amino acids)

>RPSI07_RS01735 AcrB/AcrD/AcrF family protein (Ralstonia solanacearum PSI07)
MIGVVRVALRRPYTFVVMALLLLIVGPLAALRTPTDIFPEIRIPVIAVAWQYTGLSPDQM
SGRISSPFQRILTTAVNDIEHIEAGTYSGVGIVKIFFQPGVNIATANAQVTAATQVALRQ
MPAGTQPPVILNYNAATVPILQLALSGEGLSEQQLFDLGMNTVRTPLVTVPGAAIPLPYG
GKQRQVQIDLDPAALQARGLSAQDVSAALAAQNVLVPIGTQKIGSLEYTLQLNSAPSAIA
EIGRIPVKVVDGTTVLLRDVAQVRDGSAPQTNIVHVDGGRSVLMSVLKNGSASTLAIVDG
VREKLAQMRAALPGALKVLPINDQSVFVRAAVKGVALEGATAAVLTSLMILLFLGSWRPT
LIIAVSIPLSILGAIVAMAALGQTLNLMTLGGLALAVGILVDDATVTIENINWHLEQGKD
VETAILDGAQQIAVPAFISLLCICIVLVPMFFLEGVSRFLFVPMAMAVILAMVCSFILSR
TLVPTMAKFLLRAHHGHAGAGSPRNPLARQQRRFEAGFERMRAGYRGLLRQALAHRGRFL
IGFAAAVLASFALLPFIGSNFFPSVDSGQILMHARVPVGTRIEETAERFARIERAIRRVI
PAVEIETLVDNIGLPPSNINLTYNSTGVSGSHDGDFQIALRDGHRPTADYVRQLRDVLPD
AFPDTQFWFPPADIVSQILNFGAPAPIDLQVRGRDLDANFAFAQRLAARLRAVPGVVDVR
IQQSNKAPVFNVDIDRTQAQLLGLTARDVTNSLVVNLAGSGQVAPTFWLNPANGISYPIV
MQTPQHELDSLAALQNLPVGNGSTPNATTLGGIASLGRSTGSTVISQYDVQPMVQVHAAA
QGRDLGAVATDIRRVLAELAGDVPKGASVQLVGQVQTMDRAFTGLFVGLAGAVLLIYLLV
VVNFQSWRDPAVIVSALPAALAGIVWMLFATQTTLSVPALTGAIMCMGVATANSVLVVSF
ARERLAELGDAAAAALEAGHVRFRPVLMTALAMVIGMLPMALGLGEGGEQNAPLGRAVVG
GLITATVATLIFVPVLFSLVHARDARMSEPGPEPIPRLPEPNASSHA