Protein Info for QEN71_RS43285 in Paraburkholderia sabiae LMG 24235
Annotation: BREX system P-loop protein BrxC
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
KEGG orthology group: None (inferred from 94% identity to bgd:bgla_1g14250)Predicted SEED Role
"ATPase-like protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (1218 amino acids)
>QEN71_RS43285 BREX system P-loop protein BrxC (Paraburkholderia sabiae LMG 24235) MKIRELFVKPIDRPINGVVKADQRDDESVWQELDEYVATKEVTEYLRRFFDAYLATVDRP NDPTIAARMGVWVSGFFGSGKSHFIKILSYLLSNLEATHPEDGARRHAVEFFNSKVKDPM LLGDIRRAVTSNTDVVLFNIDAKADSKSDRDAILQVFLRVFNEMQGLSGDAPHVADMERY LISKGAYATFKRAFQAANGNAWERERDAVDFLRDDVIAGLSDALDMSPDSAAKWFDNARD AYKINIEGFATLVRKYLDAKGPRHRIVFLVDEVGQFIGKNTQLMLNLQTITEELGTQCKG RAWVIVTSQEDIDATLGEVNQARTNDFSKITGRFHTRLSLSSSNTDEVISHRLLEKTLAA RDALEALWASKGDIINNQLSFADHAIAFRRYRDAADFAAHYPFAPYQFQLLQKVFESIRK VGATGRHLARGERSMLDAFQTAAKHNGNEDVNALVPLYDFYPAIESFLDSSVKRAIDQAA TNPALEEWDLQLLRALFLIRYADAVKGTIDNLATLCLDEVDADKLALKRTIEAALQRLER QNLVSRNGELWFFLTNEERDVSQEVKSVSISEGEISRLVAELVFDEILGGQTKVRHRETK SDYEFNRLLDGAPYKQANQALTFEVLSPVGAEYEMMHEARCIGRSAEGTAGRALLRMAND ARVYVELKTYLQIEKYIAPKVDTASPSLKRILYDRKDENRDRRTRMLSQLSEMVSAGDFY AMGQRLTCKPQSPPALLDEMLNYLVTNTYFKLGYLKVRQSDPIAEIRAVLSADTIGQQSI ALEGEAGNALALGEMRQFLDMSAQNSRVLLSDVVERFAGVPWGWRPEWESVLLVARLFMA GEIKLVMDGADLDPLAAIEPLTKAARLKSVSILKRKTSDAQTRAKVRELHRDMFSTMPPD EEDPLVAEFRANLARLKADLERARGKAELKDYPGSSEIAEALGAIDRQLARRDAFEFLEA LATQRNEWRTRADDIHDVLSFYQNQAPVWARLLEALSSFADNREPLLNDATAAAAFAELE RIRSNPAPYGQVNRIEQLVATVERVNDALAAERRERALRSVDAKIAEAMHALDGANADAD LRNRALKPLQDLKAQLASMMSIPRILFLQGRAGDLLDAAMDQIARVARSRPAAASHPGAS AANSTALSPGAAGGPTGGGPAAPAAASAPTARPVKVIRTSDLSAKTYLDTAQDVDDYLAK LREELISAIESGHRARLQ