Protein Info for QEN71_RS43140 in Paraburkholderia sabiae LMG 24235

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 362 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 30 to 52 (23 residues), see Phobius details amino acids 73 to 93 (21 residues), see Phobius details amino acids 123 to 144 (22 residues), see Phobius details amino acids 156 to 176 (21 residues), see Phobius details amino acids 182 to 207 (26 residues), see Phobius details amino acids 227 to 247 (21 residues), see Phobius details amino acids 267 to 286 (20 residues), see Phobius details amino acids 294 to 314 (21 residues), see Phobius details amino acids 325 to 345 (21 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 56% identity to reu:Reut_B4432)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (362 amino acids)

>QEN71_RS43140 hypothetical protein (Paraburkholderia sabiae LMG 24235)
MNRYLPLLALAALVAICIAAWSVAPRALLGAYLATWWFCCGLVMGGLANVWVHNLTGGRW
GEVIREPLLELSRLVWILALLFLPMLIGMHDLYSWVSRASTGAQRWTDELPAHSAWFKSL
WLTPWFFVVRSVFYLVVWTLLASLSRSPSLRRSARFSAAALIVYGLTVSLAAVDWVMSLM
PIWYSSVFGMLVGLSQALAGMALAAVIATRMRPLPPPIIFRDLGNLLLMYVMTWAYLAFT
QFLIIWAENLPHEIAWYIPRMEHGWLYVAWLLAVFHFLAPLLILLFRNAKEAPALLGALA
VGLLAAHQLDVWWTIFPSLPVDWLQWLWTVPLVIIAFFVAGYVAIRKGSGSATATAAGAD
YV