Protein Info for QEN71_RS37440 in Paraburkholderia sabiae LMG 24235

Annotation: FUSC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 720 transmembrane" amino acids 34 to 66 (33 residues), see Phobius details amino acids 77 to 97 (21 residues), see Phobius details amino acids 102 to 122 (21 residues), see Phobius details amino acids 129 to 149 (21 residues), see Phobius details amino acids 155 to 177 (23 residues), see Phobius details amino acids 391 to 412 (22 residues), see Phobius details amino acids 417 to 435 (19 residues), see Phobius details amino acids 443 to 464 (22 residues), see Phobius details amino acids 470 to 487 (18 residues), see Phobius details amino acids 494 to 514 (21 residues), see Phobius details amino acids 526 to 550 (25 residues), see Phobius details PF04632: FUSC" amino acids 28 to 705 (678 residues), 448.6 bits, see alignment E=4.9e-138 PF13515: FUSC_2" amino acids 40 to 171 (132 residues), 29 bits, see alignment E=1.1e-10

Best Hits

KEGG orthology group: None (inferred from 53% identity to bgf:BC1003_3905)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (720 amino acids)

>QEN71_RS37440 FUSC family protein (Paraburkholderia sabiae LMG 24235)
MNGDAGIAVRPQWRDELRQYWREDYPRFRHTAKVAIASTLAMGLCMLLELRGPATAMVSC
IVVMMFQQSGMVIARGFYRGLGMLGGSLAGLALVSLFSQAQWMFLLVLASWIGVCVFASS
YFRNFQSYGFLLTGYATAITSLPALSNPYGVFDNLVYTVSEVVIGVACASLVSALIFPRR
VALDLVAASNGNIGHLFAAIHALLGTALPKDGFGTMLDLLRERANVQSLRGGAVFEDPSI
RLQNHAFIKVDTYFIDALVSAHMLHEVIAGTPHARQVANELVDALLSIVPKGLAPDTPVE
QQIDVLQLPLAEFERGLAGRIDALLQTTHDEPQRISIETTGAALHGFVGNLRELCRSFVE
ARRADRRSWQQSVLRSLTHIDSTRATSNRAAAIINGMRAAAAVLAVGAIWIASGWVGGSS
ALVSVAIVSALFTLAPDPVVASWQMFCGCVAGTIVGFVISFFVFPLFDSFGLLAACLAFP
IMFSTYLNTFPKTATLGLGFGVFFCYSVNVANPVTYHPAQFLDTAFGLSLGIAAAAVAFS
TIVPLAGDWISKQYLKQMRSLVTKSARDRGLDDLLQRFESGMRGFIMLIASAPAGERVDQ
TRLVASAFAALEVGRAMIVIRKDTERVAAWLPDGWRAVQDEWLDALADVFAAATTESRAR
ATNATLRAEQALARVEPSVSTADSLLMKRMRRLMRFSALMLGDDTLPLWQAANAAKGVPA