Protein Info for QEN71_RS33750 in Paraburkholderia sabiae LMG 24235

Annotation: FAD-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 456 PF07992: Pyr_redox_2" amino acids 8 to 316 (309 residues), 195.2 bits, see alignment E=6.9e-61 PF00070: Pyr_redox" amino acids 170 to 247 (78 residues), 73.6 bits, see alignment E=6.3e-24 PF02852: Pyr_redox_dim" amino acids 338 to 443 (106 residues), 95.4 bits, see alignment E=9.7e-31

Best Hits

KEGG orthology group: None (inferred from 85% identity to rcu:RCOM_0056870)

Predicted SEED Role

"PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase" in subsystem Mercuric reductase

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (456 amino acids)

>QEN71_RS33750 FAD-dependent oxidoreductase (Paraburkholderia sabiae LMG 24235)
MATVEHYEHVFLGGGKGGKSLAMELAQAGHKVAVIERGMIGGSCINVACIPTKTLIQNAR
IAHIRHQQDGAATDMAAVSQRVKAVVDGMVELNHDAFRKSGLELVLGTGRFVGPRRIEVK
TNDGALRVIEGDHAYINTGTTAAIPDLPGLRAAEPLTHVEALVLTTLPEHLIVIGGGYIG
LEMAQAFRRLGSKVTLLQNAPRVATREDEDVSDAIEAALKEDGIDIRTGAKPTGVTGTSG
RSVTVALEGGDSITGTHILVAAGRTPVTSGIGLDAAGVELDARGFIKTDERLATTAERTW
AIGEVAGTPMFTHASFDDYRVLRSQLAGGNVTTKDRIIPYALFIEPELGRIGLNESEARA
KGIAVRVVKLPMAAVPRARTNGATKGFMKMLIDAQSDAILGFTMLGTNAGDVVTAVQMAM
LGGLPYQRVRDAIIAHPLISEGLNILLAKVPERTAS