Protein Info for QEN71_RS31595 in Paraburkholderia sabiae LMG 24235

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 20 to 161 (142 residues), 132 bits, E=2.4e-42
• PF08402: TOBE_2
  • amino acids 284 to 355 (72 residues), 54.2 bits, E=1.3e-18

Best Hits

Swiss-Prot: 44% identical to POTA_RUEST: Spermidine/putrescine import ATP-binding protein PotA (potA) from Ruegeria sp. (strain TM1040)

KEGG orthology group: K02052, putative spermidine/putrescine transport system ATP-binding protein (inferred from 94% identity to bph:Bphy_6630)

MetaCyc: 46% identical to sn-glycerol 3-phosphate ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-34-RXN [EC: 7.6.2.10]; 7.6.2.10 [EC: 7.6.2.10]

Predicted SEED Role

"ABC-type spermidine/putrescine transport systems, ATPase components"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.6.2.10

Protein Sequence (363 amino acids)

>QEN71_RS31595 ABC transporter ATP-binding protein (Paraburkholderia sabiae LMG 24235)
MSFLTLTDVSKTFGDLHAVTGINLSVEKGEFVSLLGPSGCGKTTTLQMIAGFIDTTRGRI
TLDGRDITHMKPNRRGLGIVFQSYALFPHMSVAQNVSFGLEMRGVDKAERKDRVREALAL
VRLDSLAHRFPRELSGGQRQRVAIARAIVIAPPVLLLDEPMSNLDAKLREDMQFELRAIQ
RKIGTTTIMVTHDQSEALSISDRVVVMEAGRITQIDTPYRAYERPENLFVSQFIGKANML
AGKIVSRDGDAIRIDFGHDLAETGSMTQLGSQGQAIDVGDAVTLCIRPEKLRLCAPGEGR
LAGNVTSRFFLGSQWLYRLDSRVGEMLVCCQNEGNEPFAEGARVGIDWHADSLRLIGQER
AHG