Protein Info for QEN71_RS30650 in Paraburkholderia sabiae LMG 24235

Annotation: trifunctional serine/threonine-protein kinase/ATP-binding protein/sensor histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1800 1900 1984 PF07714: PK_Tyr_Ser-Thr" amino acids 92 to 251 (160 residues), 68 bits, see alignment E=4.3e-22 PF00069: Pkinase" amino acids 94 to 253 (160 residues), 93.8 bits, see alignment E=6.3e-30 PF13191: AAA_16" amino acids 292 to 481 (190 residues), 152.1 bits, see alignment E=1e-47 PF13185: GAF_2" amino acids 1306 to 1450 (145 residues), 46.3 bits, see alignment 2.6e-15 PF01590: GAF" amino acids 1306 to 1449 (144 residues), 60.1 bits, see alignment 1.7e-19 PF13492: GAF_3" amino acids 1376 to 1450 (75 residues), 33 bits, see alignment (E = 3.6e-11) PF08447: PAS_3" amino acids 1486 to 1568 (83 residues), 42.8 bits, see alignment (E = 2.6e-14) PF02518: HATPase_c" amino acids 1870 to 1979 (110 residues), 78.9 bits, see alignment 2e-25

Best Hits

Predicted SEED Role

"Signal transduction histidine kinase CheA (EC 2.7.3.-)" in subsystem Bacterial Chemotaxis or Flagellar motility or Two-component regulatory systems in Campylobacter (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1984 amino acids)

>QEN71_RS30650 trifunctional serine/threonine-protein kinase/ATP-binding protein/sensor histidine kinase (Paraburkholderia sabiae LMG 24235)
MDFTGFQLELLHDDGDLSLCRALRPDTTVSLLALIATRPAAQSIARLEREYELAALLDPR
WAAQPIALDLGRVPPMLVLDDDGGDPLVRLLGQPLDLARCLRIAANLARAIGHVHERGLI
HKDIKPANVLVDGNDGVRLTGFGIASQLPLEHQSPAPPEIIAGTFAYMAPEQTGRMNRSI
DARSDLYSFGVTLYEMLTGGLPFAAADAMEWIHCHIARRPTPLEERNESIPPTVGQIVLK
LLEKTAESRYQTAAGVEADLRACLAAWETTRAIAPLSLGERDASDRLLIPEKLYGRDAQI
GEIVAAFNRIVGGGRSELVLISGYAGIGKSSVVNELHKVLVPPRGLFASGKFDQYKRDIP
YVPLAQAFQSLVRELLSKSDAEIEPWRRALQDALAPNGQVIVNLIPELALIIGEQPAVPT
LPPQESQNRFQLVFRSFLGVFARREHPLALFIDDLQWLDAATLDLLQHLVTHPDVQHVLL
VGAYRSNEVDDAHPLARTLDAIAQTEATVHQIELAPLTADSVAQLVADALHCPATTAVPL
AQLVHEKTGGNPFFAIQFLSALADEALLTFDRDTSRWTWDLPRICAKGFTENVADLMAAK
LTRLPDATREALGQLASLGNVADVATLTLVHGEPEASIHAKLWLAVRAGLVFRVEAAYGF
AHDRVQEAAYALIPADRRAATHVRIGRALASRTSPDALEESIFDIVNQLNRGAELIDTDE
ERERTVALNLIAGRRAMRSTAYAAARSYLAQGVALLSPDAWTRRYESTFDLYLAYSECEY
LAGDFTDADALFDMLLERARSSLDRAKVFGLRMSLYQVAGRFDESFAVARLALRDFGLLL
PDTDGEVESAVAAALQEIPYRLAGRAIGDLVDAPVAQDPAIRAVIDLLVEAMPCAFIARP
AYYPLITLKAVLLSLQHGNTDNSSFAYGNYALMLVSSIGDIPSAVQFSEMSLRLNEKFDN
RRFYGKLLHLHGNHINFWRRHIVTDLPILERASAACLEVGDLVFAGYLAFTTVWQTIEKG
SALDDVQAVSEKHAAFARQSHNDAVFETIRLEQQFIASLRGITTEPLKLGDALFDDAACF
DAIETANFGCGIVFHHIMQMILAYLDGRHADASKAASDAAPMLGAVMALPIESTYHFFNA
LTLAARYPGAGIEMQQAWRSTLAQTLDRFESWSTHCPENFRHRHALLAAEIARIEGRDSD
AMHFYEEAIRAAREHGFIQYQAMAHELAAQFHAARGLETIADTYLFNARSCYERWGAKGK
VRQLARTYAQLRHDPASLDGTIATSNEQLDLATVVQVSRAIFSGIDLNELIHTLMVLALE
HAGANRGLLIFRRGNDLRVEAEASTAQNGVDVRLPKMRATGNELPESVLRYVIRTGDSLL
LDDASARSPFSSDEYIRRHDCRSILCLPLVKQTRLIGVLYLENNLTTDAFTPARTALLRL
LASQAALSLETARLYADLQDAEALLADAQRLSHTGSFDWHVSSGELVWSKESFRIFGYDV
DTTPTVDMMFGRVHPDDVTFVRLAFDRATHDRQPFDIEHRLWMPDGTIRHLQVLAHVVVD
EESRMRVLGALKDITVRKQAHAALERSEHRYRSLFFDMPVGLWQIEAQPLMTLLTELRAQ
GVDDLSAYIDDHPGWLNRAMEMLVVEEINHHAAQMFGATDRSALLGPLPWVWRESPGTFR
RALESRYSGEAIFQETTKLPTLDGRIIDVLFTIARPSSTEDLGIALISLVDLTERVRAQD
MLQRLQADFAHAARISMLGELTASVAHELNQPLSAIAMNSAISNRWLDRAVPDVAEARLI
NQRVAADARRAVDIVDRIRSMALRRDPKRAVAQLDELIDEALIFLQHEVRSRGVIVLRQR
AVVAPMVLADRVQLQQVIVNLVVNAMQAMEQAASSERKITIRTQTPDGATVNCALEDSGP
GIAPEAISRLFQSFYTTKENGMGMGLPICRSIIEAHGGRICADNGSVHGGARFSFTLPSA
EAAR