Protein Info for QEN71_RS30560 in Paraburkholderia sabiae LMG 24235

Annotation: PaaI family thioesterase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 128 TIGR00369: uncharacterized domain 1" amino acids 15 to 120 (106 residues), 55.6 bits, see alignment E=2.6e-19 PF13622: 4HBT_3" amino acids 39 to 122 (84 residues), 41.6 bits, see alignment E=1.2e-14 PF03061: 4HBT" amino acids 40 to 114 (75 residues), 55.6 bits, see alignment E=5.7e-19

Best Hits

KEGG orthology group: None (inferred from 44% identity to gob:Gobs_3656)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (128 amino acids)

>QEN71_RS30560 PaaI family thioesterase (Paraburkholderia sabiae LMG 24235)
MSTLAIESEFCIDQGFELVDHGDNWATLACVVRPRHSNRHGNAHGGLLAALLDTSMGMSV
RTSGRVENLGTASLTVNYLKPARGRIVVHAQVRRCGRTLAFCEAEARNADDDVVATASAV
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