Protein Info for QEN71_RS30545 in Paraburkholderia sabiae LMG 24235

Annotation: CaiB/BaiF CoA-transferase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02515: CoA_transf_3
  • amino acids 9 to 375 (367 residues), 394.1 bits, E=3.3e-122

Best Hits

KEGG orthology group: None (inferred from 67% identity to bpt:Bpet3431)

MetaCyc: 42% identical to succinate--lglutarate CoA-transferase (Agrobacterium fabrum C58)
Succinate--hydroxymethylglutarate CoA-transferase. [EC: 2.8.3.13]

Predicted SEED Role

"L-carnitine dehydratase/bile acid-inducible protein F"

MetaCyc Pathways

• L-lysine degradation X (4/6 steps found)
• L-lysine degradation IV (2/5 steps found)
• superpathway of L-lysine degradation (12/43 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.8.3.13

Protein Sequence (399 amino acids)

>QEN71_RS30545 CaiB/BaiF CoA-transferase family protein (Paraburkholderia sabiae LMG 24235)
MTTTPIKPLANVTIVELARVLACPFADMILAELGANVIKIEQPGSGDETRTFEPQVGDES
AYFFACNRGKQSVTANLKTDAGRRIVRDLAQSADIFIENFPVGTLARYGLDHAALRAANE
RLIYVSCTGFGQTGPYAKRKGYDTVFQAMGGLMSLTGERGGGPVKPGLPIADLTSGMWIA
IGLLSALNGRAVTGQGCHIDFSMLDGQVSLLTLAAGRYFALGEVPPRLGTEHPGRVPSAT
FACSDGAFVHITCSDQHWLPLCKLLGLEALAGDTTLATNAGRVEHRDRVMSALTQAISGW
TRQALCEACDAAGVPAGPIQNVAEVLADPHVNARGMVGSFEHPTVGTFGALPLPFKFDGF
ADPQVERPPLLGEHTEQVLRERLGYDEAHIAALRRDGAI