Protein Info for QEN71_RS27710 in Paraburkholderia sabiae LMG 24235

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 486 transmembrane" amino acids 30 to 53 (24 residues), see Phobius details amino acids 72 to 93 (22 residues), see Phobius details amino acids 102 to 121 (20 residues), see Phobius details amino acids 127 to 145 (19 residues), see Phobius details amino acids 162 to 181 (20 residues), see Phobius details amino acids 192 to 214 (23 residues), see Phobius details amino acids 283 to 306 (24 residues), see Phobius details amino acids 318 to 336 (19 residues), see Phobius details amino acids 348 to 367 (20 residues), see Phobius details amino acids 379 to 398 (20 residues), see Phobius details amino acids 409 to 431 (23 residues), see Phobius details amino acids 444 to 465 (22 residues), see Phobius details PF07690: MFS_1" amino acids 52 to 303 (252 residues), 81.9 bits, see alignment E=6.3e-27 amino acids 291 to 472 (182 residues), 45.3 bits, see alignment E=8.9e-16 PF00083: Sugar_tr" amino acids 68 to 439 (372 residues), 160.5 bits, see alignment E=1.1e-50

Best Hits

KEGG orthology group: None (inferred from 95% identity to bph:Bphy_2729)

Predicted SEED Role

"bll0324; putative sugar transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (486 amino acids)

>QEN71_RS27710 MFS transporter (Paraburkholderia sabiae LMG 24235)
MQEPTVRTDPSTIVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVASALK
SSDVLRFSNADVGLAGSAYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAATAFS
WNLASFLVFRFLTGAGIGGEYTAINSTIQEFTPARVRGHTDLAINGTFWVGAALGAIGSL
VLLDPHLLPGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEAREIVEGIEA
RFRAENHALPDDALKRLRLRARERTTLREVFHTLFVVHRRRALVGLSLMTAQAFFYNAIF
FTYALVLTDFYHVPGDHIGWYILPFALGNFAGPLLIGRLFDVIGRRKMITATYAISAILL
TLSGYLFEQQMLTVTTQTIAWMVIFFFASSAASSAYLTVSESFPLEIRALAIAVFYAFGT
ALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAAVIAAIWGVDAERRSLETVAAPL
SAVEDE