Protein Info for QEN71_RS26495 in Paraburkholderia sabiae LMG 24235

Annotation: molecular chaperone DnaK

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 649 TIGR02350: chaperone protein DnaK" amino acids 3 to 606 (604 residues), 948.9 bits, see alignment E=5e-290 PF00012: HSP70" amino acids 4 to 606 (603 residues), 881.7 bits, see alignment E=2.1e-269 PF06723: MreB_Mbl" amino acids 115 to 378 (264 residues), 42.3 bits, see alignment E=4.4e-15

Best Hits

Swiss-Prot: 96% identical to DNAK_PARP8: Chaperone protein DnaK (dnaK) from Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)

KEGG orthology group: K04043, molecular chaperone DnaK (inferred from 96% identity to bph:Bphy_2497)

MetaCyc: 72% identical to chaperone protein DnaK (Escherichia coli K-12 substr. MG1655)
Non-chaperonin molecular chaperone ATPase. [EC: 3.6.4.10, 5.6.1.7]

Predicted SEED Role

"Chaperone protein DnaK" in subsystem Heat shock dnaK gene cluster extended or Protein chaperones

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.4.10 or 5.6.1.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (649 amino acids)

>QEN71_RS26495 molecular chaperone DnaK (Paraburkholderia sabiae LMG 24235)
MGKIIGIDLGTTNSCVALMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVT
NPKNTLYAVKRLIGRRFEEKEVQKDIGLMPYKIVKHDNGDAWVEAHGNKLAPSQVSAEVL
RKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFG
LDKAEKGDRKIAVFDLGGGTFDISIIEIADVDGEMQFEVLSTNGDTFLGGEDFDQRIIDY
IIGEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSSGQQTEINLPYITADASGPKHLNLK
ITRAKLEALVEDLIERTIEPCRVAIKDAGVKVGEIDDVILVGGQTRMPKVQEKVKEFFGK
DPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMINKNTTIP
TKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVSFDID
ANGILHVGAKDKATGKENRITIKANSGLSEAEIEKMVKDAEANAEEDHKLRELADARNQG
DALVHSTKKALTEYGDKLDAGEKEKIEAALKDLEETLKSGSSDKAAIEAKIETVATASQK
LGEKMYADMQAQGAAGAAGAAGAAGAEAAGASQQADDVVDAEFKEVKKD