Protein Info for QEN71_RS25040 in Paraburkholderia sabiae LMG 24235

Annotation: adhesin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 637 PF18071: HMW1C_N" amino acids 4 to 143 (140 residues), 164.6 bits, see alignment E=1.3e-52 PF18254: HMw1_D2" amino acids 153 to 236 (84 residues), 54.2 bits, see alignment E=2e-18

Best Hits

KEGG orthology group: None (inferred from 67% identity to bxe:Bxe_B0723)

Predicted SEED Role

"putative accessory processing protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (637 amino acids)

>QEN71_RS25040 adhesin (Paraburkholderia sabiae LMG 24235)
MSTEFSLDQFETLVASRDYDAAHEALVVLINTFISNRSRLPGVDLAFADPTRPASEEAAL
TLQRIADAITVLLADPHFRLTDVQFNQLFSARHWLNMLFVASSYGSMDHILRALLAHSAQ
SNDPEEAKALIRKQIVLYTVESEYDIDLADLAQSEPVLATSLGMSVVGSAVVISPAAHAK
RERMIEWLPRALESIEDLDELPGSAVCGAYMHCSYSDLPNRHAMKRGISQLVRRKLDSLG
LLAHEAEPGRAVALEARGKRENHKPLMIVVLEWFNGGHSIYRTHSRTMLAARERFEVVAF
GEEQHVDAAGREVFDRFIPFEHPEYVGEIVRQVEDFARENRPAVLYMPSVGMFPHTIFMT
NVRVAPLQIAALGHPATMHAECIDYVSVEEDFVGDPMCFSEKLMRLPKDGQPYVPSKLLT
DITPSVPERGMYVNIAVTASAMKLNPRFLDACRQIIETAGVPVCFHFMTSWAEGLDIAYV
RKLVESALPRSNVLVYGGLSYSTYLKVINVMDMFVSPFPFGNTNGIVDAFTLGLPGVNLC
GREVFEHIDSGLFERAGMPAWLTAHSIDEYVRAAVRLATQHDEREALRRQMIEKKAVERI
FEGRPEAFGRNVLALVNAQAQNHVKSQTSGKSKTKRK