Protein Info for QEN71_RS24685 in Paraburkholderia sabiae LMG 24235

Annotation: chromate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 405 transmembrane" amino acids 22 to 43 (22 residues), see Phobius details amino acids 61 to 84 (24 residues), see Phobius details amino acids 93 to 115 (23 residues), see Phobius details amino acids 127 to 146 (20 residues), see Phobius details amino acids 158 to 187 (30 residues), see Phobius details amino acids 208 to 226 (19 residues), see Phobius details amino acids 238 to 260 (23 residues), see Phobius details amino acids 272 to 294 (23 residues), see Phobius details amino acids 300 to 320 (21 residues), see Phobius details amino acids 340 to 358 (19 residues), see Phobius details amino acids 382 to 402 (21 residues), see Phobius details PF02417: Chromate_transp" amino acids 22 to 183 (162 residues), 78.9 bits, see alignment E=2.4e-26 amino acids 240 to 392 (153 residues), 92.2 bits, see alignment E=2e-30

Best Hits

KEGG orthology group: K07240, chromate transporter (inferred from 95% identity to bph:Bphy_2121)

Predicted SEED Role

"Chromate transport protein ChrA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (405 amino acids)

>QEN71_RS24685 chromate transporter (Paraburkholderia sabiae LMG 24235)
MTALHAPAGDETTRCNEREPLWTLFRVVFGLSALSWGGLALMAQLENHYVEREERLTRLA
FSDIVALAWMVPGPVGCNVAVQLGHVLRGRAGAWVAGLASVLPFFMLMTAFAIFYQTPIV
REVASQTLLNHFSVVLATLIGVTWYKQTRSLVRGRLEWAAAILGSIALIGAHTPAAYIGI
LGAAFMSGWVRSDARGARLSTTLSAGDWRLLIGLCVLLLIFALPLPHRYDVALLWPRLAG
AGLTLFGGGFSALPVLKTLFVTPTVGVTDNEFTLAFSLSPLSPGPLLNVVPFFGYLVEGW
RGAIIATIALFVPSGCLVVLAQRHLHQLKMNPRFEHGMRVLRAVTTAFLAVAVLRIVRNV
PFEPAYLVTALFSGVCFAKLKLPVYAVYGSVAVACGVWLYFGHVG