Protein Info for QEN71_RS23200 in Paraburkholderia sabiae LMG 24235

Annotation: FUSC family membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 808 transmembrane" amino acids 15 to 37 (23 residues), see Phobius details amino acids 43 to 61 (19 residues), see Phobius details amino acids 69 to 85 (17 residues), see Phobius details amino acids 91 to 110 (20 residues), see Phobius details amino acids 117 to 136 (20 residues), see Phobius details amino acids 140 to 162 (23 residues), see Phobius details amino acids 402 to 419 (18 residues), see Phobius details amino acids 425 to 443 (19 residues), see Phobius details amino acids 450 to 468 (19 residues), see Phobius details amino acids 473 to 494 (22 residues), see Phobius details amino acids 497 to 519 (23 residues), see Phobius details amino acids 524 to 543 (20 residues), see Phobius details PF12805: FUSC-like" amino acids 69 to 351 (283 residues), 269 bits, see alignment E=6.3e-84 PF04632: FUSC" amino acids 401 to 480 (80 residues), 34.1 bits, see alignment E=1.9e-12 PF13515: FUSC_2" amino acids 414 to 535 (122 residues), 82.9 bits, see alignment E=3.3e-27

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (808 amino acids)

>QEN71_RS23200 FUSC family membrane protein (Paraburkholderia sabiae LMG 24235)
MRYSVEIKKFLYSQYFYGGLRIAVGVSLPAILCLIVFHNRELGFTIATGALGACVVDMPG
PLKYKHNEMLACSVIGFLAALATGLATVNPVALWCAVVPLTFVLSLIVVYGNRWPQISFA
TLFMMVMTLEEHFTPLQALINASWMLVGGLWFTYWSTFVSHWMMYRIEQQALAESVFALA
DYLLARADFFDLDNDLDECYRNLVAKQIAAVAMQDAARDIVLRNLPKLKSGRLEPRRATL
FNLFIHIVDLHEQFVGAHTDYSLVRNTFGGSDLLIFYRDLIRKAAADLEDIGLAVLQNEP
PRARINVKAELRAIEYEIELMRKQELPKKNPEAYSTISASFRRVWSATRLIDRMRKNLAN
EEGSKETDLRIDQALTRFVSSRRVPFGSIFSNLTMASPSFRHALRVTIAVAVGFWLGRLL
PLTNAYWIVMTTVIILKPGYSLTKQRNGQRIVGTLIGCAASIALIMSVKSPHLLIVVMFA
SMVMSYSLLLFNYTASVVFTSSYVLLMFHLLAPGSLHIIGERAIDTVVGCAIAIAASHLF
PYWEYRLMGKLVDDMIAAMRSYLEASWWWGGKPATSAASSVTAPAALTEAAALAPAVAVA
EVMASGANGVTEAAVAASAAGVSISATAAAKPPAPTPAAAAAASALDRDYRYRLARKNVH
VAFANLGQAFQRMMLEPKSAQKFVPELNDLLVRSHVLASQITAAAPLLRTSSQQLGGPSH
QPLQRALTLIRDNLTQAEEGNPPPTDQVEISKQLTRELDTMVVEAERSPDYAPDAVHELK
LLAHQCKQMLAASFQIRKDAGIIRLPEN