Protein Info for QEN71_RS20575 in Paraburkholderia sabiae LMG 24235

Annotation: potassium transporter Kup

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 640 transmembrane" amino acids 25 to 44 (20 residues), see Phobius details amino acids 61 to 84 (24 residues), see Phobius details amino acids 118 to 142 (25 residues), see Phobius details amino acids 151 to 172 (22 residues), see Phobius details amino acids 184 to 211 (28 residues), see Phobius details amino acids 228 to 249 (22 residues), see Phobius details amino acids 261 to 281 (21 residues), see Phobius details amino acids 301 to 323 (23 residues), see Phobius details amino acids 354 to 375 (22 residues), see Phobius details amino acids 381 to 402 (22 residues), see Phobius details amino acids 410 to 433 (24 residues), see Phobius details amino acids 439 to 459 (21 residues), see Phobius details PF02705: K_trans" amino acids 28 to 562 (535 residues), 710.6 bits, see alignment E=6.1e-218

Best Hits

Swiss-Prot: 64% identical to KUP_NITMU: Probable potassium transport system protein kup (kup) from Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71)

KEGG orthology group: K03549, KUP system potassium uptake protein (inferred from 95% identity to bph:Bphy_4723)

Predicted SEED Role

"Kup system potassium uptake protein" in subsystem Potassium homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (640 amino acids)

>QEN71_RS20575 potassium transporter Kup (Paraburkholderia sabiae LMG 24235)
MSLSATHAGAESIGAPAPHKPALRSLALAALGVVYGDIGTSPLYTLQTVFAPSSGLPLTP
LNVIGIVSLIFWSLTIVVSLKYVALILRANNHGEGGIMALLALASSSVANRPRLRHTLLV
VGVMGASLFYGDSIITPAISVLSAVEGLEVAAPFLKTCVIPVTLIALVTLFVMQKHGTSG
IGAVFGPVMVVWFVVLAVVGVTNVVAAPAILAALDPLAGLAFCLRHEWLAFIALGAVVLS
LTGAEALYADMGHFGARPIRLTWFGLVFPALALNYLGQGALLISKPAAVQNPFYLLFPQW
ALYPMIVLATVATVIASQAVISGTYSMTKQAMQLGFLPRMNVVYTSEKEIGQIYVPGINW
TLLAAVVAAVLGFGSSTALGSAYGIAVTGTMLITTLLTFFVVRYAWHYNWALCVFATAFF
FVIDATFFAANLLKIVEGGWFPLLIGFVMFTIMATWGRGWEIMLAEARARAGTMPLKTYL
QKLVAREPVRVGGTAIFLTPNPDSVPHALVNNLIHNHVLHKRVVFLTVNNDEIPWVAESE
RVSLTTVCEGCYQLTIRYGFKDEVDLPKALATAKSLGLDVEPDEASYFLSRATVVPTPGA
GMAMWRERLFAVMLHNVGNVAAYFKLPANRVIEVGARVEI