Protein Info for QEN71_RS20445 in Paraburkholderia sabiae LMG 24235

Annotation: LysE family translocator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 207 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details transmembrane" amino acids 39 to 64 (26 residues), see Phobius details amino acids 70 to 91 (22 residues), see Phobius details amino acids 146 to 168 (23 residues), see Phobius details amino acids 184 to 203 (20 residues), see Phobius details PF01810: LysE" amino acids 15 to 202 (188 residues), 100.8 bits, see alignment E=3.7e-33

Best Hits

KEGG orthology group: None (inferred from 96% identity to bph:Bphy_4701)

Predicted SEED Role

"Putative threonine efflux protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (207 amino acids)

>QEN71_RS20445 LysE family translocator (Paraburkholderia sabiae LMG 24235)
MSLTAWLFFLPACFAINMAPGPNNLLSINVAARHGFMTAFVAGSGRLVAFAGMLVLAATG
LAVVLHASELFFLAIKLTGAAYLIWLAIQLWRSDAGPMDAMKQDDASLWRIARQECFVAA
GNPKAILVFTAFLPQFVDISKPMLPQFAVLGASFLVLEWFAIALYSWAGMHLGKWLTRAT
VRRWFNRCCGAFLGAIGVSFLLVRRTT