Protein Info for QEN71_RS18280 in Paraburkholderia sabiae LMG 24235

Annotation: transglutaminase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1136 PF08379: Bact_transglu_N" amino acids 6 to 84 (79 residues), 82.8 bits, see alignment 3.5e-27 PF01841: Transglut_core" amino acids 130 to 246 (117 residues), 54.4 bits, see alignment E=2.3e-18 PF09899: DUF2126" amino acids 276 to 1134 (859 residues), 1326.9 bits, see alignment E=0

Best Hits

Predicted SEED Role

"Large protein containing transglutaminase-like domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1136 amino acids)

>QEN71_RS18280 transglutaminase family protein (Paraburkholderia sabiae LMG 24235)
MSIRVALNHVTHYRYDRLVGLSPQVVRLRPAPHCRTPILSYSMRVEPGQHFINWQQDAFA
NYQARLVFPERTPEFKITVDLVAEMAVYNPFDFFLEPSAEQFPFEYAPELAAELAPYRMK
REMTPRFAEFVASIDRSPRGTTDFLVDLNQRVQREIRYLIRMEPGVQTPEETLVNASGSC
RDSGWLLVETLRQLGLAARFVSGYLLQLAPDTKSLDGPSGTEYDFTDLHAWCEVFLPGAG
WIGFDPTSGLLAGEGHIPVACTPEPGSAAPISGAVDESEVEFAHAMSITRVLESPRVTKP
YTEAAWDRVLTMGAHVDSRLDAMDVRLTMGGEPTFVSVRDRDAAEWNTDALGPTKRAYAV
ALMDKLRAYYGANGFLHIGQGKWYPGEQLPRWALSLYWRADGEACWRDPTLFADERSPGY
YTADDAQRFLNVLAGKLSVDSQYVQAGYEDTWYYLWRERRLPVNVDPFDSRLEDEMERVR
LRRVFDAGLSGVTGYVLPIARDEIDKGWTSGAWFFRDDRMYLIPGDSPMGYRLPLDSLPW
VSKADYPYQHAHDPFAEAMPLRTSAELRMQYDGVSKDDAPRGASARATGTGIGTAPQDRV
PEHGESASSVIRTALCVEARNPARAAGPKVEADSMSDGRALLHVFMPPLTELDDYLDLLA
AVEATAAELHMQVVIEGYPPPRDPGLKVLQVTPDPGVIEVNIHPAKNWNELVDHTEFLYN
AAHESYLSTEKFMLDGRHAGTGGGNHFVLGGATPVDSPFLRRPDLLASLVAYWHNHPSLS
YLFSGLFIGPTSQAPRIDEARNDQVYELELAFDELQRQIDLLGGRESAQLPPWMIDRALR
NILIDVTGNTHRAEFCIDKLYSPDGPTGRLGLLELRGFEMPPHARMSLVQQLLLRALVAK
FWQKPYTTRLTRWGTELHDRFLLGTFVQMDFDDVLADLRDAGFAFDSEWFAPHFAFRFPA
IGEMHANGLSLAISGALEPWHVMGEEGAAGGTVRYVDSSVERLEVKVLGLNDNRHRVSVN
GVTLPLQPTGRVSEFVAGVRFRAWQQSSSLHPTIGVHAPLTFDVVDMWTGRSIGGCQYHV
AHPGGRNYQTFPVNAYEAESRRRARFFTTGHTPGALAVEDAPRSQEFPFTLDLRHW